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the setting is accessible under the menu window > preferences > general > startup and shutdown > workspaces :
here i can remove a workspace from the list. the same settings page configures the number of workspaces to remember, and if eclipse is prompting for it at startup time.
hint: if you are wondering, where these settings are stored, then see this blog post . it is inside that file: \configuration\.settings\org.eclipse.ui.ide.prefs
happy workspacing
Workspace
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