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The Latest Data Engineering Topics

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Changing MySQL Binary Log Files Location to Another Directory
What is the Default? Usually in most installations, binary log files are located in the MySQL default directory (/var/lib/mysql) just next to the data files. Why Should I Move the Binary Logs to Another Directory? Each data modification (INSERT, UPDATE, DELETE...) and data definition (ALTER, ADD, DROP...) statement that you perform in your server are recorded in the Log files. Therefore, each time you make any of these statements, you actually update both your data files and your log files. The result is high IO utilization that is focused on a specific disk area. A common recommendation in the database field is to separate these files to two different disks in order to get a better performance. How to Perform it? Change the log-bin variable in the my.cnf to log-bin=/path/to/new/directory/mysql-bin Purge as many files as you can (PURGE BINLOG...) in order to minimize the number of moved files (see stop 4). Stop the master (service mysql stop). Move the files to the new directory: mv /var/lib/mysql/mysql-bin.* /path/to/new/directory Start the master again (service mysql start). Bottom Line Few steps and your server is ready for more traffic and data. Keep Performing, Moshe Kaplan
June 30, 2013
by Moshe Kaplan
· 49,449 Views
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Linksheet: Apache Cassandra
Curator's note: This collection of resources collected by Tim Spann will help you get started with Apache Cassandra, the open source distributed database system originally developed at Facebook. http://hector-client.github.io/hector/build/html/index.html https://www.openshift.com/blogs/cassandra-on-openshift https://github.com/shekhargulati/cassandra-openshift-quickstart-java http://whyjava.wordpress.com/2012/02/23/logging-jaxws-soap-request-and-response-using-a-java-property/ https://dzone.com/articles/creating-your-first-java https://github.com/boneill42/naughty-or-nice http://www.slideshare.net/DataStax/college-credit-creating-your-first-app-in-java-with-cassandra
June 30, 2013
by Tim Spann DZone Core CORE
· 5,314 Views · 1 Like
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Integration of Amazon Redshift Data Warehouse with Talend Data Integration
In this blog post, I will show you how to "ETL" all kinds of data to Amazon’s cloud data warehouse Redshift wit Talend’s big data components. Let’s begin with a short introduction to Amazon Redshift (copied from website): "Amazon Redshift is [part of Amazon Web Services (AWS) and] a fast and powerful, fully managed, petabyte-scale data warehouse service in the cloud. With a few clicks in the AWS Management Console, customers can launch a Redshift cluster, starting with a few hundred gigabytes and scaling to a petabyte or more, for under $1,000 per terabyte per year. Traditional data warehouses require significant time and resource to administer, especially for large datasets. In addition, the financial cost associated with building, maintaining, and growing self-managed, on-premise data warehouses is very high. Amazon Redshift not only significantly lowers the cost of a data warehouse, but also makes it easy to analyze large amounts of data very quickly.“ Sounds interesting! And indeed, we already see companies using Talend’s Redshift connectors. From Talend perspective it is not much more than just another database. If you have ever used a Talend connector, you can integrate to Redshift within some minutes. In the next sections, I will describe all necessary steps and give some hints regarding configuration issues and performance improvements. Be aware: You need Talend Open Studio for Data Integration (Apache License, open source) or any Talend Enterprise Edition / Platform which contains the Cloud components to see and use Amazon Redshift connectors. The open source edition offers all connectors and functionality to integrate with Amazon Redshift. However, Enterprise versions offer some more features (e.g. versioning), comfort (e.g. wizards) and commercial support. Setup Amazon Redshift Setup of Amazon Redshift is very easy. Just follow Amazon‘s getting started guide: http://docs.aws.amazon.com/redshift/latest/gsg/welcome.html. Like every other AWS guide, it is very easy to understand and use. Be aware, that you just have to do step 1, 2 and 3 of the getting started guide for using it with Talend. Some hints: - Step 1 („before you begin“): Just sign up. Client tools and drivers are not necessary because they are already installed within Talend Studio. - Step 2 („launch a cluster“): Yes, please start your cluster! - Step 3(„authorize access“): If you are not sure what to do here, select Connection Type = CIDR/IP. Find out your IP address (http://whatismyipaddress.com) and enter it with „/32“ at the end. Example: „192.168.1.1/32“ Now you can connect to Amazon Redshift from your Talend Studio on your local computer. Step 4 (connect) and step 5 (create table, data, queries) are not necessary, this will be done from Talend Studio. Of course, you should not forget to delete your cluster (step 7) when you are done. Otherwise, you will pay for every hour, even if you do not access your DWH. Connect to Amazon Redshift from Talend Studio Create a new connection to Amazon Redshift database as you do with every other relational database. The easiest way is to use „DB Connection Wizard“ in metadata. Just enter your connection information and check if it works. You get all information about configuration from Amazon Web Console. The connection string looks something like this: „jdbc:paraccel://talend-demo-cluster.cp8t6c5.eu-west-1.redshift.amazonaws.com:5439/dev“ Next, right click on the created connection and select „retrieve schema“. „public“ is the default schema which you (have to) use. Now, you are ready to use this connection within Talend Jobs to write to Amazon Redshift and read from it. Create Talend Jobs (Write, Read, Delete) Amazon Redshift components work like any other Talend (relational) database components. Look at www.help.talend.com for more information if you have not used them before (or just try them out, they are very self-explanatory). You just have to drag&drop your connection from metadata . Afterwards, you can easily write data (tRedShiftOutput), read data (tRedshiftInput), or do any other queries such as delete or copy (tRedShiftRow). In the following job, I start with deleting all content in the Amazon Redshift table. Then, I read data from a MySQL table and insert it into an Amazon Redshift table. The table is created automatically (as I have configured it this way). After this subjob is finished, I read the data again, and store it to a CSV file (which is also created automatically). Of course, this is no business use case, but it shows how to use different Amazon Redshift components. Query Data from Amazon Redshift You can connect to Amazon Redshift directly from Talend Studio to explore and query data of the DWH. Thus, no other database tool is required. Just right click on your Amazon Redshift connection in metadata and select „edit queries“. Here you can define, execute and save SQL queries. Improve Performance Write performance of Amazon Redshift is relatively low compared to „classical“ relational databases (in your data center) as you have to upload all data into the cloud. Different alternatives exist to improve performance: - Bulk inserts: „Extended insert“ (in advanced settings) improves performance a lot, but still not to hyperspeed… Also, as it is bulk, you can just do inserts! It is not compatible to „rejects“ or „updates“ - AWS S3 and COPY command: S3 is Amazon’s „simple storage service“, a key-value store – also called NoSQL today – for storing very large objects. You can use Amazon Redshift’s COPY command (http://docs.aws.amazon.com/redshift/latest/dg/r_COPY.html) to transfer data from S3 to Amazon Redshift with good performance. Though, you still have to copy data to S3 before, same „cloud problem“ here. The COPY command can be used with tRedshiftRow, so no problem at all from Talend perspective. To transfer data to S3, you can either use the Talend S3 components from Talendforge, Talend’s open source community (http://www.talendforge.org/exchange), or use camel-s3, an Apache Camel component which is included in Talend ESB. The latter is an option, if you use Talend Data Services which combines Talend DI and Talend ESB in its unified platform. Summary You need not be a cloud or DWH expert, or an expert developer to integrate with Amazon’s cloud data warehouse Redshift. It is very easy with Talend’s integration solutions. Just drag&drop, configure, do some graphical mappings / transformations (if necessary), that’s it. Code is generated. Job runs. You can integrate Amazon Redshift almost as simple as any other relational database. Just be aware of some cloud specific security and performance issues. With Talend, you can easily „ETL“ all data from different sources to Redshift and store it there for under $1,000 per terabyte per year – even with the open source version! Best regards, Kai Wähner (Contact and feedback via @KaiWaehner, www.kai-waehner.de, LinkedIn / Xing) This is content from my blog: http://www.kai-waehner.de/blog/2013/06/26/integration-of-amazon-redshift-cloud-data-warehouse-aws-saas-dwh-with-talend-data-integration-di-big-data-bd-enterprise-service-bus-esb/
June 27, 2013
by Kai Wähner DZone Core CORE
· 20,738 Views · 1 Like
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Akka vs Storm
I was recently working a bit with Twitter’s Storm, and it got me wondering, how does it compare to another high-performance, concurrent-data-processing framework, Akka. WHAT’S AKKA AND STORM? Let’s start with a short description of both systems. Storm is a distributed, real-time computation system. On a Storm cluster, you execute topologies, which process streams of tuples (data). Each topology is a graph consisting of spouts (which produce tuples) and bolts (which transform tuples). Storm takes care of cluster communication, fail-over and distributing topologies across cluster nodes. Akka is a toolkit for building distributed, concurrent, fault-tolerant applications. In an Akka application, the basic construct is an actor; actors process messages asynchronously, and each actor instance is guaranteed to be run using at most one thread at a time, making concurrency much easier. Actors can also be deployed remotely. There’s a clustering module coming, which will handle automatic fail-over and distribution of actors across cluster nodes. Both systems scale very well and can handle large amounts of data. But when to use one, and when to use the other? There’s another good blog post on the subject, but I wanted to take the comparison a bit further: let’s see how elementary constructs in Storm compare to elementary constructs in Akka. COMPARING THE BASICS Firstly, the basic unit of data in Storm is a tuple. A tuple can have any number of elements, and each tuple element can be any object, as long as there’s a serializer for it. In Akka, the basic unit is amessage, which can be any object, but it should be serializable as well (for sending it to remote actors). So here the concepts are almost equivalent. Let’s take a look at the basic unit of computation. In Storm, we have components: bolts andsprouts. A bolt can be any piece of code, which does arbitrary processing on the incoming tuples. It can also store some mutable data, e.g. to accumulate results. Moreover, bolts run in a single thread, so unless you start additional threads in your bolts, you don’t have to worry about concurrent access to the bolt’s data. This is very similar to an actor, isn’t it? Hence a Storm bolt/sprout corresponds to an Akka actor. How do these two compare in detail? Actors can receive arbitrary messages; bolts can receive arbitrary tuples. Both are expected to do some processing basing on the data received. Both have internal state, which is private and protected from concurrent thread access. ACTORS & BOLTS: DIFFERENCES One crucial difference is how actors and bolts communicate. An actor can send a message to any other actor, as long as it has the ActorRef (and if not, an actor can be looked up by-name). It can also send back a reply to the sender of the message that is being handled. Storm, on the other hand is one-way. You cannot send back messages; you also can’t send messages to arbitrary bolts. You can also send a tuple to a named channel (stream), which will cause the tuple (message) to be broadcast to all listeners, defined in the topology. (Bolts also ack messages, which is also a form of communication, to the ackers.) In Storm, multiple copies of a bolt’s/sprout’s code can be run in parallel (depending on theparallelism setting). So this corresponds to a set of (potentially remote) actors, with a load-balancer actor in front of them; a concept well-known from Akka’s routing. There are a couple of choices on how tuples are routed to bolt instances in Storm (random, consistent hashing on a field), and this roughly corresponds to the various router options in Akka (round robin, consistent hashing on the message). There’s also a difference in the “weight” of a bolt and an actor. In Akka, it is normal to have lots of actors (up to millions). In Storm, the expected number of bolts is significantly smaller; this isn’t in any case a downside of Storm, but rather a design decision. Also, Akka actors typically share threads, while each bolt instance tends to have a dedicated thread. OTHER FEATURES Storm also has one crucial feature which isn’t implemented in Akka out-of-the-box: guaranteed message delivery. Storm tracks the whole tree of tuples that originate from any tuple produced by a sprout. If all tuples aren’t acknowledged, the tuple will be replayed. Also the cluster management of Storm is more advanced (automatic fail-over, automatic balancing of workers across the cluster; based on Zookeeper); however the upcoming Akka clustering module should address that. Finally, the layout of the communication in Storm – the topology – is static and defined upfront. In Akka, the communication patterns can change over time and can be totally dynamic; actors can send messages to any other actors, or can even send addresses (ActorRefs). So overall, Storm implements a specific range of usages very well, while Akka is more of a general-purpose toolkit. It would be possible to build a Storm-like system on top of Akka, but not the other way round (at least it would be very hard).
June 26, 2013
by Adam Warski
· 21,452 Views
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3 Ways to Optimize for Paging in MySQL
Lots and lots of web applications need to page through information. From customer records, to the albums in your itunes collection. So as web developers and architects, it’s important that we do all this efficiently. Start by looking at how you’re fetching information from your MySQL database. We’ve outlined three ways to do just that. 1. Paging without discarding records Ultimately we’re trying to avoid discarding records. After all if the server doesn’t fetch them, we save big. How else can we avoid this extra work. How about remember the last name. For example: select id, name, address, phone FROM customers WHERE id > 990 ORDER BY id LIMIT 10; Of course such a solution would only work if you were paging by ID. If you page by name, it might get messier as there may be more than one person with the same name. If ID doesn’t work for your application, perhaps returning paged users by USERNAME might work. Those would be unique: SELECT id, username FROM customers WHERE username > '[email protected]' ORDER BY username LIMIT 10; Paging queries can be slow with SQL as they often involve the OFFSET keyword which instructs the server you only want a subset. However it typically scans collects and then discards those rows first. With deferred join or by maintaining a place or position column you can avoid this, and speedup your database dramatically. 2. Try using a Deferred Join This is an interesting trick. Suppose you have pages of customers. Each page displays ten customers. The query will use LIMIT to get ten records, and OFFSET to skip all the previous page results. When you get to the 100th page, it’s doing LIMIT 10 OFFSET 990. So the server has to go and read all those records, then discard them. SELECT id, name, address, phone FROM customers ORDER BY name LIMIT 10 OFFSET 990; MySQL is first scanning an index then retrieving rows in the table by primary key id. So it’s doing double lookups and so forth. Turns out you can make this faster with a tricky thing called a deferred join. The inside piece just uses the primary key. An explain plan shows us “using index” which we love! SELECT id FROM customers ORDER BY name LIMIT 10 OFFSET 990; Now combine this using an INNER JOIN to get the ten rows and data you want: SELECT id, name, address, phone FROM customers INNER JOIN ( SELECT id FROM customers ORDER BY name LIMIT 10 OFFSET 990) AS my_results USING(id); That’s pretty cool! 3. Maintain a Page or Place column Another way to trick the optimizer from retrieving rows it doesn’t need is to maintain a column for the page, place or position. Yes you need to update that column whenever you (a) INSERT a row (b) DELETE a row ( c) move a row with UPDATE. This could get messy with page, but a straight place or position might work easier. SELECT id, name, address, phone FROM customers WHERE page = 100 ORDER BY name; Or with place column something like this: SELECT id, name, address, phone FROM customers WHERE place BETWEEN 990 AND 999 ORDER BY name;
June 25, 2013
by Sean Hull
· 21,417 Views
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Implementing Memcached a Servlet Filter for Spring MVC-Based RESTful Services
I have a number of Spring MVC based RESTful services that return JSON. In 90% of the cases, the state of objects these services return will not change within a 24 hour period. This makes them (the JSON objects) perfect candidates for simple caching enabled by memcached. The idea was to have every request to Spring controllers intercepted, cache key generated and checked against the cache. If the key and corresponding value (JSON string) is available (a cache hit), it is returned to the caller as-is without making a full round trip to the database. However, if the cache has no entry for the key and hence no corresponding value (a cache miss), the call is forwarded to the controller, which in turn calls the logic to fetch desired object from the database and not only return it to the caller but also update the cache with the returned content. Keys are generated using the URL of the service in case of GET requests and the URL concatenated with POSTed input (as JSON) in case of POST requests. The resultant strings are encoded with MD5 to come up with a 32 character cache key which is well within the 250 character key length limit of memcached. Performance impact of using MD5 is yet to be evaluated during our load testing cycle. I started off trying to get hold of JSON response in the postHandle method of a Spring HandlerInterceptor. However since we are using @ResponseBody annotation in our controller, the JSON would be written directly to the stream. The ModelAndView was of course null because of this reason. If we removed the annotation and returned ModelAndView from the controller, the intended JSON object got enclosed in a map wrapper. A quick question on stack overflow didn’t help as the only suggestion I got was to extract my original object from the map wrapper. I wanted to keep this option (as discussed here as well ) as my last resort. The solution I eventually came up with involved Replacing the HandlerInterceptor with Servlet Filters Using DelegatingFilterProxy to make my filters spring application context aware Using HttpServletRequestWrapper to get control of the POST request body in the filter on the way in Using HttpServletResponseWrapper to get control of the response content in the filter on the way out True, its probably a more complex solution than just overriding MappingJacksonJsonView and extracting my JSON object, but it is more generic as it does not assume that all my content will always be JSON. Lets first start with the filter definition in the web.xml cacheFilter org.springframework.web.filter.DelegatingFilterProxy ... cacheFilter /* A standard filter configuration except for the fact that the filter class is always going to be org.springframework.web.filter.DelegatingFilterProxy. Where do you specify your own class ? As a bean in your spring context xml. The name of the filter and the name of the bean must be the same for the delegation to happen. Using the DelegatingFilterProxy allowed me to use my Filters with Spring. I can inject my dependencies as I would normally. Next, lets look at my MemcacheFilter filter Memcache Filter Class public class MemcacheFilter implements Filter { private static Logger logger = Logger.getLogger(MemcacheFilter.class); private CacheConfig cacheConfig; /** * Memcached lookup is being performed in this method. Firstly, keys are * generated depending on the request method (GET/POST). Then a cache lookup * is performed. If a value is obtained, the value is written to the * response otherwise, the actual target (in this case, Spring's Dispatcher * Servlet) is called by calling doFilter on the filteChain. The dispatcher * servlet calls the controller to produce the desire response which is * intercepted when the doFilter method returns. The Response is added to * the cache if the reponse code was 200(OK). * * @param request * @param response * @param filterChain * @throws IOException * @throws ServletException */ public void doFilter(ServletRequest request, ServletResponse response, FilterChain filterChain) throws IOException, ServletException { try { if ((request instanceof HttpServletRequest) && (response instanceof HttpServletResponse)) { // Wrapping the response in HTTPServletResponseWrapper MemcacheResponseWrapper responseWrap = new MemcacheResponseWrapper((HttpServletResponse) response); // Wrapping the request in HTTPServletResponseWrapper MemcacheRequestWrapper requestWrap = new MemcacheRequestWrapper((HttpServletRequest) request); // Get Memcached Client Instance MemcachedClient client = cacheConfig.getMemcachedClient(); Key keyGenerator = getKeyGenerator(requestWrap); if (keyGenerator != null) { String key = keyGenerator.getKey(requestWrap, cacheConfig); String value = (String) client.get(key); if (value == null) { // cache miss logger.info("Cache miss for key " + key); // call next filter/actual target for value filterChain.doFilter(requestWrap, responseWrap); if (responseWrap.getStatus() == HttpServletResponse.SC_OK) { // obtaining response content from // HttpServletResponseWrapper value = responseWrap.getOutputStream().toString(); // adding response to cache client.add(key, 0, value); logger.info("Adding response to cache: "+ (value.length() > 50 ? value.substring(0,50) + "..." : value)); } else { logger.warn("Did not add content to cache as response status is not 200"); } } else { // This case is a cache hit logger.info("Cache hit for key " + key); response.getWriter().println(value); } } else { logger.warn("Request skipped because no key generator could be found for the request's method"); // attempting call to actual target filterChain.doFilter(request, response); } } } catch (Exception ex) { logger.info("Cache functionality skipped due to exception", ex); // attempting call to actual target filterChain.doFilter(request, response); } } /** * Factory method that returns KeyGenerator based on the request method. * * @param httpRequest * @return */ private Key getKeyGenerator(HttpServletRequest httpRequest) { Key keyGenerator = null; if (httpRequest.getMethod().equalsIgnoreCase("GET")) { keyGenerator = new GetRequestKey(); } else if (httpRequest.getMethod().equalsIgnoreCase("POST")) { keyGenerator = new PostRequestKey(); } return keyGenerator; } public void init(FilterConfig arg0) throws ServletException { logger.debug("init"); } public CacheConfig getCacheConfig() { return cacheConfig; } public void setCacheConfig(CacheConfig cacheConfig) { this.cacheConfig = cacheConfig; } public void destroy() { logger.debug("destroy"); } } 1. I first wrap my request and response objects in the following statements. I have had to create the wrappers as well. Will get to those later. // Wrapping the response in HTTPServletResponseWrapper MemcacheResponseWrapper responseWrap = new MemcacheResponseWrapper((HttpServletResponse) response); // Wrapping the request in HTTPServletResponseWrapper MemcacheRequestWrapper requestWrap = new MemcacheRequestWrapper((HttpServletRequest) request); 2. Next, I have one of my injected classes, CacheConfig, provide me with a memcache client which I will use later to look up the cache. // Get Memcached Client Instance MemcachedClient client = cacheConfig.getMemcachedClient(); 3. I make a call to a function that tells me which key generator I should use, a GET one or a POST one depending on the request method. Key keyGenerator = getKeyGenerator(requestWrap); /** * Factory method that returns KeyGenerator based on the request method. * * @param httpRequest * @return */ private Key getKeyGenerator(HttpServletRequest httpRequest) { Key keyGenerator = null; if (httpRequest.getMethod().equalsIgnoreCase("GET")) { keyGenerator = new GetRequestKey(); } else if (httpRequest.getMethod().equalsIgnoreCase("POST")) { keyGenerator = new PostRequestKey(); } return keyGenerator; } 4. Check for a cache hit using the Key returned by the Key Generator. If its a miss, call next filter or target to compute actual value, get value from the response wrapper, and add it to the cache. if (keyGenerator != null) { String key = keyGenerator.getKey(requestWrap, cacheConfig); String value = (String) client.get(key); if (value == null) { // cache miss logger.info("Cache miss for key " + key); // call next filter/actual target for value filterChain.doFilter(requestWrap, responseWrap); if (responseWrap.getStatus() == HttpServletResponse.SC_OK) { // obtaining response content from // HttpServletResponseWrapper value = responseWrap.getOutputStream().toString(); // adding response to cache client.add(key, 0, value); logger.info("Adding response to cache: "+ (value.length() > 50 ? value.substring(0,50) + "..." : value)); } 5. If its a cache hit, just get return cached value else { // This case is a cache hit logger.info("Cache hit for key " + key); response.getWriter().println(value); } Lets take a look at each of the Wrappers. I am not going into a a lot of detail into how each of these work. Request Wrapper Class On the way in, the original POST content is extracted from the request and put in a String Buffer. To the filter, this content is returned via the toString() method of the WrappedInputStream class whereas the subsequently called controller calls the read method. public class MemcacheRequestWrapper extends HttpServletRequestWrapper { protected ServletInputStream stream; protected HttpServletRequest origRequest = null; protected BufferedReader reader = null; public MemcacheRequestWrapper(HttpServletRequest request) throws IOException { super(request); origRequest = request; } public ServletInputStream createInputStream() throws IOException { return (new WrappedInputStream(origRequest)); } @Override public ServletInputStream getInputStream() throws IOException { if (reader != null) { throw new IllegalStateException("getReader() has already been called for this request"); } if (stream == null) { stream = createInputStream(); } return stream; } @Override public BufferedReader getReader() throws IOException { if (reader != null) { return reader; } if (stream != null) { throw new IllegalStateException("getReader() has already been called for this request"); } stream = createInputStream(); reader = new BufferedReader(new InputStreamReader(stream)); return reader; } private class WrappedInputStream extends ServletInputStream { private StringBuffer originalInput = new StringBuffer(); private HttpServletRequest originalRequest; private ByteArrayInputStream byteArrayInputStream; public WrappedInputStream(HttpServletRequest request) throws IOException { this.originalRequest = request; BufferedReader bufferedReader = null; try { InputStream inputStream = request.getInputStream(); if (inputStream != null) { bufferedReader = new BufferedReader(new InputStreamReader(inputStream)); char[] charBuffer = new char[128]; int bytesRead = -1; while ((bytesRead = bufferedReader.read(charBuffer)) > 0) { originalInput.append(charBuffer, 0, bytesRead); } } byteArrayInputStream = new ByteArrayInputStream(originalInput.toString().getBytes()); } catch (IOException ex) { throw ex; } finally { if (bufferedReader != null) { try { bufferedReader.close(); } catch (IOException ex) { throw ex; } } } } @Override public String toString() { return this.originalInput.toString(); } @Override public int read() throws IOException { return byteArrayInputStream.read(); } } } Response Wrapper Class The response wrapper is similar to the request wrapper. Instead of the read method, there is a write method, called by the controller when its writing JSON content. This is stored in the wrapper and called in the filter. public class MemcacheResponseWrapper extends HttpServletResponseWrapper { protected ServletOutputStream stream; protected PrintWriter writer = null; protected HttpServletResponse origResponse = null; private int httpStatus = 200; public MemcacheResponseWrapper(HttpServletResponse response) { super(response); response.setContentType("application/json"); origResponse = response; } public ServletOutputStream createOutputStream() throws IOException { return (new WrappedOutputStream(origResponse)); } public ServletOutputStream getOutputStream() throws IOException { if (writer != null) { throw new IllegalStateException("getWriter() has already been called for this response"); } if (stream == null) { stream = createOutputStream(); } return stream; } public PrintWriter getWriter() throws IOException { if (writer != null) { return writer; } if (stream != null) { throw new IllegalStateException("getOutputStream() has already been called for this response"); } stream = createOutputStream(); writer = new PrintWriter(stream); return writer; } @Override public void sendError(int sc) throws IOException { httpStatus = sc; super.sendError(sc); } @Override public void sendError(int sc, String msg) throws IOException { httpStatus = sc; super.sendError(sc, msg); } @Override public void setStatus(int sc) { httpStatus = sc; super.setStatus(sc); } public int getStatus() { return httpStatus; } private class WrappedOutputStream extends ServletOutputStream { private StringBuffer originalOutput = new StringBuffer(); private HttpServletResponse originalResponse; public WrappedOutputStream(HttpServletResponse response) { this.originalResponse = response; } @Override public String toString() { return this.originalOutput.toString(); } @Override public void write(int arg0) throws IOException { originalOutput.append((char) arg0); originalResponse.getOutputStream().write(arg0); } } }
June 25, 2013
by Faheem Sohail
· 22,689 Views · 1 Like
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Resolving SOAPFaultException caused by com.ctc.wstx.exc. WstxUnexpectedCharException
If you’re using any of these tools for Web Services – Axis2, CXF etc. – that internally make use of Woodstox XML processor (wstx), and you're getting an exception like this during webservice calls, javax.xml.ws.soap.SOAPFaultException: Error reading XMLStreamReader. at org.apache.cxf.jaxws.JaxWsClientProxy.invoke(JaxWsClientProxy.java:...) ... Caused by: com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character ... at com.ctc.wstx.sr.StreamScanner.throwUnexpectedChar(StreamScanner.java:...) at com.ctc.wstx.sr.BasicStreamReader.nextFromProlog(BasicStreamReader.java:...) at com.ctc.wstx.sr.BasicStreamReader.next(BasicStreamReader.java:...) at com.ctc.wstx.sr.BasicStreamReader.nextTag(BasicStreamReader.java:...) the problem is that the wstx tokenizer/parser encountered unexpected (but not necessarily invalid per se) character; character that is not legal in current context. Could happen, for example, if white space was missing between attribute value and name of next attribute, according to API docs (http://woodstox.codehaus.org/3.2.9/javadoc/com/ctc/wstx/exc/WstxUnexpectedCharException.html). This simply means that you’re receiving an ill-formed SOAP XML as response. You need to check the SOAP response construction logic/code at the other end you’re communicating to.
June 24, 2013
by Singaram Subramanian
· 21,237 Views
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Automating Nginx Reverse Proxy Configuration
It’s really nice if you can decouple your external API from the details of application segregation and deployment. In a previous post I explained some of the benefits of using a reverse proxy. On my current project we’ve building a distributed service oriented architecture that also exposes an HTTP API, and we’re using a reverse proxy to route requests addressed to our API to individual components. We have chosen the excellent Nginx web server to serve as our reverse proxy; it’s fast, reliable and easy to configure. We use it to aggregate multiple services exposing HTTP APIs into a single URL space. So, for example, when you type: http://api.example.com/product/pinstripe_suit It gets routed to: http://10.0.1.101:8001/product/pinstripe_suit But when you go to: http://api.example.com/customer/103474783 It gets routed to http://10.0.1.104:8003/customer/103474783 To the consumer of the API it appears that they are exploring a single URL space (http://api.example.com/blah/blah), but behind the scenes the different top level segments of the URL route to different back end servers. /product/… routes to 10.0.1.101:8001, but /customer/… routes to 10.0.1.104:8003. We also want this to be self-configuring. So, say I want to create a new component of the system that records stock levels. Rather than extending an existing component, I want to be able to write a stand-alone executable or service that exposes an HTTP endpoint, have it be automatically deployed to one of the hosts in my cloud infrastructure, and have Nginx automatically route requests addressed http://api.example.com/stock/whatever to my new component. We also want to load balance these back end services. We might want to deploy several instances of our new stock API and have Nginx automatically round robin between them. We call each top level segment ( /stock, /product, /customer ) a claim. A component publishes an ‘AddApiClaim’ message over RabbitMQ when it comes on line. This message has 3 fields: ‘Claim', ‘ipAddress’, and ‘PortNumber’. We have a special component, ProxyAutomation, that subscribes to these messages and rewrites the Nginx configuration as required. It uses SSH and SCP to log into the Nginx server, transfer the various configuration files, and instruct Nginx to reload its configuration. We use the excellent SSH.NET library to automate this. A really nice thing about Nginx configuration is wildcard includes. Take a look at our top level configuration file: ... http { include /etc/nginx/mime.types; default_type application/octet-stream; log_format main '$remote_addr - $remote_user [$time_local] "$request" ' '$status $body_bytes_sent "$http_referer" ' '"$http_user_agent" "$http_x_forwarded_for"'; access_log /var/log/nginx/access.log main; sendfile on; keepalive_timeout 65; include /etc/nginx/conf.d/*.conf; } Line 16 says, take any *.conf file in the conf.d directory and add it here. Inside conf.d is a single file for all api.example.com requests: include /etc/nginx/conf.d/api.example.com.conf.d/upstream.*.conf; server { listen 80; server_name api.example.com; include /etc/nginx/conf.d/api.example.com.conf.d/location.*.conf; location / { root /usr/share/nginx/api.example.com; index index.html index.htm; } } This is basically saying listen on port 80 for any requests with a host header ‘api.example.com’. This has two includes. The first one at line 1, I’ll talk about later. At line 7 it says ‘take any file named location.*.conf in the subdirectory ‘api.example.com.conf.d’ and add it to the configuration. Our proxy automation component adds new components (AKA API claims) by dropping new location.*.conf files in this directory. For example, for our stock component it might create a file, ‘location.stock.conf’, like this: location /stock/ { proxy_pass http://stock; } This simply tells Nginx to proxy all requests addressed to api.example.com/stock/… to the upstream servers defined at ‘stock’. This is where the other include mentioned above comes in, ‘upstream.*.conf’. The proxy automation component also drops in a file named upstream.stock.conf that looks something like this: upstream stock { server 10.0.0.23:8001; server 10.0.0.23:8002; } This tells Nginx to round-robin all requests to api.example.com/stock/ to the given sockets. In this example it’s two components on the same machine (10.0.0.23), one on port 8001 and the other on port 8002. As instances of the stock component get deployed, new entries are added to upstream.stock.conf. Similarly, when components get uninstalled, the entry is removed. When the last entry is removed, the whole file is also deleted. This infrastructure allows us to decouple infrastructure configuration from component deployment. We can scale the application up and down by simply adding new component instances as required. As a component developer, I don’t need to do any proxy configuration, just make sure my component publishes add and remove API claim messages and I’m good to go.
June 19, 2013
by Mike Hadlow
· 59,264 Views
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Relations with not-found="ignore"
NHibernate has a lot of interesting and specific option for mapping entities that can really cover every scenario you have in mind, but you need to be aware of every implication each advanced option has on performances. If you are in a legacy-database scenario where entity A reference Entity B, but someone outside the control of NHibernate can delete record from table used by Entity B, without setting the corresponding referencing field on Entity A. We will end with a Database with broken reference, where rows from Table A references with a field id a record in Table B that no longer exists. When this happens, if you load an Entity of type A that reference an Entity of type B that was deleted, it will throw an exception if you try to access navigation property, because NHibernate cannot find related entity in the Database. If you know NHibernate you can use the not-found=”Ignore” mapping option, that basically tells NHibernate to ignore a broken reference key, if EntityA references an Entity B that was already deleted from database, the reference will be ignored, navigation property will be set to Null, and no exception occurs. This kind of solution is not without side effects, first of all you will find that Every time you load an Entity of Type A another query is issued to the database to verify if related Entity B is really there. This actually disable lazy load, because related entity is always selected. This is not an optimum scenario, because you will end with a lot of extra query and this happens because not-found=”ignore” is only a way to avoid a real problem: you have broken foreign-key in your database. My suggestion is, fix data in database, keep the database clean without broken foreign-keys and remove all not-found=”ignore” mapping option unless you really have no other solution. Please remember that even if you are using NHibernate, you should not forget SQL capabilities. As an example SQL Server (and quite all of the relational database in the market) has the ability to setup rules for foreign-key, es ON DELETE SET NULL that automatically set to null a foreign key on a table, when related record is deleted. Such a feature will prevent you from having broken foreign key, even if some legacy process manipulates the database deleting records without corresponding update in related foreign-key. - See more at: http://www.codewrecks.com/blog/index.php/2013/06/18/relations-with-not-foundignore-disable-lazy-load-and-impact-on-performances/?utm_source=feedburner&utm_medium=feed&utm_campaign=Feed%3A+AlkampferEng+%28Alkampfer%27s+Place%29#sthash.93db7RQX.dpuf
June 19, 2013
by Ricci Gian Maria
· 5,275 Views
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How to Optimize MySQL UNION for High Speed
There are two ways to speedup UNIONs in a MySQL database. First use UNION ALL if at all possible, and second try to push down your conditions. 1. UNION ALL is much faster than UNION How does a UNION work? Imagine you have two tables for shirts. The short_sleeve table looks like this: blue green gray black And long_sleeve another that looks like this: red green yellow blue Related: Why Generalists are Better at Scaling the Web If you UNION those two tables, first MySQL will sort the combined set into a temp table like this: black blue blue gray green green red yellow Once it’s done this sort, it can easily remove the duplicate blue & duplicate green for this resulting set: black blue gray green red yellow See also: Mythical MySQL DBA – the talent drought. Why does it do this? UNION is defined that way in SQL. Duplicates must be removed and this is an efficient way for the MySQL engine to remove them. Combine results, sort, remove duplicates and return the set. Queries with UNION can be accelerated in two ways. Switch to UNION ALL or try to push ORDER BY, LIMIT and WHERE conditions inside each subquery. You’ll be glad you did! What if we did UNION ALL? The result would look like this: blue green gray black red green yellow blue Read this: MySQL DBA Interview & Hiring Guide. It doesn’t have to sort, and doesn’t have to remove duplicates. If you imagine combining two 10 million row tables, and don’t have to sort, this speedup can be HUGE. 2. Use Push-down Conditions to speedup UNION in MySQL Imagine with our example above the shirts have a design date, the year they were released. Yes we’re keeping this example very simple to illustrate the concept. Here is the short_sleeve table: blue 2013 green 2013 green 2012 gray 2011 black 2009 black 2011 And long_sleeve table looks like this: red 2012 red 2013 green 2011 yellow 2010 blue 2011 For 2013 designs could combine them like this: (SELECT type, release FROM short_sleeve) UNION (SELECT type, release FROM long_sleeve); WHERE release >=2013; See also: 5 More Things Deadly to Scalability and the original 5 Things Toxic to Scalability.. Here the WHERE clause works on this 11 record temp table: black 2009 black 2011 blue 2011 blue 2013 gray 2011 green 2013 green 2012 green 2011 red 2012 red 2013 yellow 2010 But it would be much faster to move the WHERE inside each subquery like this: (SELECT type, release FROM short_sleeve WHERE release >=2013) UNION (SELECT type, release FROM long_sleeve WHERE release >=2013); That would be operating on a combined 3 record table. Faster to sort & remove duplicates. Smaller result sets cache better too, providing a pay forward dividend. That’s what performance optimization is all about! Read this: RDS or MySQL – 10 Use Cases. Remember multi-million row sets in each part of this query will quickly illustrate the optimization. We’re using very small results to make visualizing easier. You can also use this optimization for ORDER BY and for LIMIT conditions. By reducing the number of records returned by EACH PART of the UNION, you reduce the work that happens at the stage where they are all combined. If you’re seeing some UNION queries in your slow query log, I suggest you try this optimization out and see if you can tweak it.
June 17, 2013
by Sean Hull
· 24,270 Views
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Searchable Documents? Yes You Can. Another Reason to Choose AsciiDoc
Elasticsearch is a flexible and powerful open source, distributed real-time search and analytics engine for the cloud based on Apache Lucene which provides full text search capabilities. It is document oriented and schema free. Asciidoctor is a pure Ruby processor for converting AsciiDoc source files and strings into HTML 5, DocBook 4.5 and other formats. Apart of Asciidoctor Ruby part, there is an Asciidoctor-java-integration project which let us call Asciidoctor functions from Java without noticing that Ruby code is being executed. In this post we are going to see how we can use Elasticsearch over AsciiDocdocuments to make them searchable by their header information or by their content. Let's add required dependencies: junit junit 4.11 test com.googlecode.lambdaj lambdaj 2.3.3 org.elasticsearch elasticsearch 0.90.1 org.asciidoctor asciidoctor-java-integration 0.1.3 Lambdaj library is used to convert AsciiDoc files to a json documents. Now we can start an Elasticsearch instance which in our case it is going to be an embedded instance. node = nodeBuilder().local(true).node(); Next step is parse AsciiDoc document header, read its content and convert them into a json document. An example of json document stored in Elasticsearch can be: { "title":"Asciidoctor Maven plugin 0.1.2 released!", "authors":[ { "author":"Jason Porter", "email":"[email protected]" } ], "version":null, "content":"= Asciidoctor Maven plugin 0.1.2 released!.....", "tags":[ "release", "plugin" ] } And for converting an AsciiDoc File to a json document we are going to useXContentBuilder class which is provided by ElasticsearchJava API to create jsondocuments programmatically. package com.lordofthejars.asciidoctor; import static org.elasticsearch.common.xcontent.XContentFactory.*; import java.io.File; import java.io.FileInputStream; import java.io.FileNotFoundException; import java.io.IOException; import java.util.List; import org.asciidoctor.Asciidoctor; import org.asciidoctor.Author; import org.asciidoctor.DocumentHeader; import org.asciidoctor.internal.IOUtils; import org.elasticsearch.common.xcontent.XContentBuilder; import ch.lambdaj.function.convert.Converter; public class AsciidoctorFileJsonConverter implements Converter { private Asciidoctor asciidoctor; public AsciidoctorFileJsonConverter() { this.asciidoctor = Asciidoctor.Factory.create(); } public XContentBuilder convert(File asciidoctor) { DocumentHeader documentHeader = this.asciidoctor.readDocumentHeader(asciidoctor); XContentBuilder jsonContent = null; try { jsonContent = jsonBuilder() .startObject() .field("title", documentHeader.getDocumentTitle()) .startArray("authors"); Author mainAuthor = documentHeader.getAuthor(); jsonContent.startObject() .field("author", mainAuthor.getFullName()) .field("email", mainAuthor.getEmail()) .endObject(); List authors = documentHeader.getAuthors(); for (Author author : authors) { jsonContent.startObject() .field("author", author.getFullName()) .field("email", author.getEmail()) .endObject(); } jsonContent.endArray() .field("version", documentHeader.getRevisionInfo().getNumber()) .field("content", readContent(asciidoctor)) .array("tags", parseTags((String)documentHeader.getAttributes().get("tags"))) .endObject(); } catch (IOException e) { throw new IllegalArgumentException(e); } return jsonContent; } private String[] parseTags(String tags) { tags = tags.substring(1, tags.length()-1); return tags.split(", "); } private String readContent(File content) throws FileNotFoundException { return IOUtils.readFull(new FileInputStream(content)); } } Basically we are building the json document by calling startObject methods to start a new object, field method to add new fields, and startArray to start an array. Then this builder will be used to render the equivalent object in json format. Notice that we are using readDocumentHeader method from Asciidoctor class which returns header attributes from AsciiDoc file without reading and rendering the whole document. And finally content field is set with all document content. And now we are ready to start indexing documents. Note that populateData method receives as parameter a Client object. This object is from Elasticsearch Java APIand represents a connection to Elasticsearch database. import static ch.lambdaj.Lambda.convert; //.... private void populateData(Client client) throws IOException { List asciidoctorFiles = new ArrayList() {{ add(new File("target/test-classes/java_release.adoc")); add(new File("target/test-classes/maven_release.adoc")); }; List jsonDocuments = convertAsciidoctorFilesToJson(asciidoctorFiles); for (int i=0; i < jsonDocuments.size(); i++) { client.prepareIndex("docs", "asciidoctor", Integer.toString(i)).setSource(jsonDocuments.get(i)).execute().actionGet(); } client.admin().indices().refresh(new RefreshRequest("docs")).actionGet(); } private List convertAsciidoctorFilesToJson(List asciidoctorFiles) { return convert(asciidoctorFiles, new AsciidoctorFileJsonConverter()); } It is important to note that the first part of the algorithm is converting all our AsciiDocfiles (in our case two) to XContentBuilder instances by using previous converter class and the method convert of Lambdaj project. If you want you can take a look to both documents used in this example in https://github.com/asciidoctor/asciidoctor.github.com/blob/develop/news/asciidoctor-java-integration-0-1-3-released.adoc and https://github.com/asciidoctor/asciidoctor.github.com/blob/develop/news/asciidoctor-maven-plugin-0-1-2-released.adoc. Next part is inserting documents inside one index. This is done by using prepareIndexmethod, which requires an index name (docs), an index type (asciidoctor), and the idof the document being inserted. Then we call setSource method which transforms theXContentBuilder object to json, and finally by calling execute().actionGet(), data is sent to database. The final step is only required because we are using an embedded instance ofElasticsearch (in production this part should not be required), which refresh the indexes by calling refresh method. After that point we can start querying Elasticsearch for retrieving information from our AsciiDoc documents. Let's start with very simple example, which returns all documents inserted: SearchResponse response = client.prepareSearch().execute().actionGet(); Next we are going to search for all documents that has been written by Alex Sotowhich in our case is one. import static org.elasticsearch.index.query.QueryBuilders.matchQuery; //.... QueryBuilder matchQuery = matchQuery("author", "Alex Soto"); QueryBuilder matchQuery = matchQuery("author", "Alexander Soto"); Note that I am searching for field author the string Alex Soto, which returns only one. The other document is written by Jason. But it is interesting to say that if you search for Alexander Soto, the same document will be returned; Elasticsearch is smart enough to know that Alex and Alexander are very similar names so it returns the document too. More queries, how about finding documents written by someone who is called Alex, but not Soto. import static org.elasticsearch.index.query.QueryBuilders.fieldQuery; //.... QueryBuilder matchQuery = fieldQuery("author", "+Alex -Soto"); And of course no results are returned in this case. See that in this case we are using afield query instead of a term query, and we use +, and - symbols to exclude and include words. Also you can find all documents which contains the word released on title. import static org.elasticsearch.index.query.QueryBuilders.matchQuery; //.... QueryBuilder matchQuery = matchQuery("title", "released"); And finally let's find all documents that talks about 0.1.2 release, in this case only one document talks about it, the other one talks about 0.1.3. QueryBuilder matchQuery = matchQuery("content", "0.1.2"); Now we only have to send the query to Elasticsearch database, which is done by using prepareSearch method. SearchResponse response = client.prepareSearch("docs") .setTypes("asciidoctor") .setQuery(matchQuery) .execute() .actionGet(); SearchHits hits = response.getHits(); for (SearchHit searchHit : hits) { System.out.println(searchHit.getSource().get("content")); } Note that in this case we are printing the AsciiDoc content through console, but you could use asciidoctor.render(String content, Options options) method to render the content into required format. So in this post we have seen how to index documents using Elasticsearch, how to get some important information from AsciiDoc files using Asciidoctor-java-integration project, and finally how to execute some queries to inserted documents. Of course there are more kind of queries in Elasticsearch, but the intend of this post wasn't to explore all possibilities of Elasticsearch. Also as corollary, note how important it is using AsciiDoc format for writing your documents. Without much effort you can build a search engine for your documentation. On the other side, imagine all code that would be required to implement the same using any proprietary binary format like Microsoft Word. So we have shown another reason to use AsciiDoc instead of other formats.
June 10, 2013
by Alex Soto
· 4,962 Views
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Using SSH.NET
I’ve recently had the need to automate configuration of Nginx on an Ubuntu server. Of course, in UNIX land we like to use SSH (Secure Shell) to log into our servers and manage them remotely. Wouldn’t it be nice, I thought, if there was a managed SSH library somewhere so that I could automate logging onto my Ubuntu server, run various commands and transfer files. A short Google turned up SSH.NET by the somewhat mysterious Olegkap (at least I couldn’t find out anything else about them) which turned out to be just what I wanted. Here’s the blurb on the CodePlex site: “This project was inspired by Sharp.SSH library which was ported from java and it seems like was not supported for quite some time. This library is complete rewrite using .NET 4.0, without any third party dependencies and to utilize the parallelism as much as possible to allow best performance I can get.” It does exactly what it says on the tin. It’s on NuGet, so you can grab it with: PM> Install-Package SSH.NET Here’s how you run a remote command. First you need to build a ConnectionInfo object: public ConnectionInfo CreateConnectionInfo() { const string privateKeyFilePath = @"C:\some\private\key.pem"; ConnectionInfo connectionInfo; using (var stream = new FileStream(privateKeyFilePath, FileMode.Open, FileAccess.Read)) { var privateKeyFile = new PrivateKeyFile(stream); AuthenticationMethod authenticationMethod = new PrivateKeyAuthenticationMethod("ubuntu", privateKeyFile); connectionInfo = new ConnectionInfo( "my.server.com", "ubuntu", authenticationMethod); } return connectionInfo; } Then you simply create an SshClient instance and run commands: public void Connect() { using (var ssh = new SshClient(CreateConnectionInfo())) { ssh.Connect(); var command = ssh.CreateCommand("uptime"); var result = command.Execute(); Console.Out.WriteLine(result); ssh.Disconnect(); } } Here I’m running the ‘uptime’ command which output this when I ran it just now: 14:37:46 up 22 days, 3:59, 0 users, load average: 0.08, 0.03, 0.05 To transfer a file, just use the ScpClient: public void GetConfigurationFiles() { using (var scp = new ScpClient(CreateNginxServerConnectionInfo())) { scp.Connect(); scp.Download("/etc/nginx/", new DirectoryInfo(@"D:\Temp\ScpDownloadTest")); scp.Disconnect(); } } Which grabs all my Nginx configuration and transfers it to a directory tree on my windows machine. All in all a very nice little library that’s been working well for me so far. Give it a try if you need to interact with a UNIX-like machine from .NET code.
June 9, 2013
by Mike Hadlow
· 31,111 Views
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IndexedDB and Date Example
about an hour ago i gave a presentation on indexeddb. one of the attendees asked about dates and being able to filter based on a date range. i told him that my assumption was that you would need to convert the dates into numbers and use a number-based range. turns out i was wrong. here is an example. i began by creating an objectstore that used an index on the created field. since our intent is to search via a date field, i decided "created" would be a good name. i also named my objectstore as "data". boring, but it works. var openrequest = indexeddb.open("idbpreso_date1",1); openrequest.onupgradeneeded = function(e) { var thisdb = e.target.result; if(!thisdb.objectstorenames.contains("data")) { var os = thisdb.createobjectstore("data", {autoincrement:true}); os.createindex("created", "created", {unique:false}); } } next - i built a simple way to seed data. i based on a button click event to add 10 objects. each object will have one property, created, and the date object will be based on a random date from now till 7 days in the future. function doseed() { var now = new date(); for(var i=0; i<10; i++) { var daydiff = getrandomint(1, 7); var thisdate = new date(); thisdate.setdate(now.getdate() + daydiff); db.transaction(["data"],"readwrite").objectstore("data").add({created:thisdate}); } } //credit: mozilla developer center function getrandomint (min, max) { return math.floor(math.random() * (max - min + 1)) + min; } note that since indexeddb calls are asynchronous, my code should handle updating the user to let them know when the operation is done. since this is just a quick demo though, and since that add operation will complete incredibly fast, i decided to not worry about it. so at this point we'd have an application that lets us add data containing a created property with a valid javascript date. note i didn't change it to milliseconds. i just passed it in as is. for the final portion i added two date fields on my page. in chrome this is rendered nicely: based on these, i can then create an indexeddb range of either bounds, lowerbounds, or upperbounds. i.e., give me crap either after a date, before a date, or inside a date range. function dosearch() { var fromdate = document.queryselector("#fromdate").value; var todate = document.queryselector("#todate").value; var range; if(fromdate == "" && todate == "") return; var transaction = db.transaction(["data"],"readonly"); var store = transaction.objectstore("data"); var index = store.index("created"); if(fromdate != "") fromdate = new date(fromdate); if(todate != "") todate = new date(todate); if(fromdate != "" && todate != "") { range = idbkeyrange.bound(fromdate, todate); } else if(fromdate == "") { range = idbkeyrange.upperbound(todate); } else { range = idbkeyrange.lowerbound(fromdate); } var s = ""; index.opencursor(range).onsuccess = function(e) { var cursor = e.target.result; if(cursor) { s += "key "+cursor.key+""; for(var field in cursor.value) { s+= field+"="+cursor.value[field]+""; } s+=""; cursor.continue(); } document.queryselector("#status").innerhtml = s; } } the only conversion required here was to take the user input and turn it into "real" date objects. once done, everything works great: you can run the full demo below.
June 7, 2013
by Raymond Camden
· 7,580 Views
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Mapping Enums Done Right With @Convert in JPA 2.1
If you ever worked with Java enums in JPA you are definitely aware of their limitations and traps. Usingenum as a property of your @Entity is often very good choice, however JPA prior to 2.1 didn’t handle them very well. It gave you 2+1 choices: @Enumerated(EnumType.ORDINAL) (default) will map enum values using Enum.ordinal(). Basically first enumerated value will be mapped to 0 in database column, second to 1, etc. This is very compact and works great to the point when you want to modify your enum. Removing or adding value in the middle or rearranging them will totally break existing records. Ouch! To make matters worse, unit and integration tests often work on clean database, so they won’t catch discrepancy in old data. @Enumerated(EnumType.STRING) is much safer because it stores string representation of enum. You can now safely add new values and move them around. However renaming enum in Java code will still break existing records in DB. Even more important, such representation is very verbose, unnecessarily consuming database resources. You can also use raw representation (e.g. single char or int) and map it manually back and forth in @PostLoad/@PrePersist/@PreUpdate events. Most flexible and safe from database perspective, but quite ugly. Luckily Java Persistence API 2.1 (JSR-388) released few days ago provides standardized mechanism of pluggable data converters. Such API was present for ages in proprietary forms and it’s not really rocket science, but having it as part of JPA is a big improvement. To my knowledge Eclipselink is the only JPA 2.1 implementation available to date, so we will use it to experiment a bit. We will start from sample Spring application developed as part of “Poor man’s CRUD: jqGrid, REST, AJAX, and Spring MVC in one house” article. That version had no persistence, so we will add thin DAO layer on top of Spring Data JPA backed by Eclipselink. Only entity so far is Book: @Entity public class Book { @Id @GeneratedValue(strategy = IDENTITY) private Integer id; //... private Cover cover; //... } Where Cover is an enum: public enum Cover { PAPERBACK, HARDCOVER, DUST_JACKET } Neither ORDINAL nor STRING is a good choice here. The former because rearranging first three values in any way will break loading of existing records. The latter is too verbose. Here is where custom converters in JPA come into play: import javax.persistence.AttributeConverter; import javax.persistence.Converter; @Converter public class CoverConverter implements AttributeConverter { @Override public String convertToDatabaseColumn(Cover attribute) { switch (attribute) { case DUST_JACKET: return "D"; case HARDCOVER: return "H"; case PAPERBACK: return "P"; default: throw new IllegalArgumentException("Unknown" + attribute); } } @Override public Cover convertToEntityAttribute(String dbData) { switch (dbData) { case "D": return DUST_JACKET; case "H": return HARDCOVER; case "P": return PAPERBACK; default: throw new IllegalArgumentException("Unknown" + dbData); } } } OK, I won’t insult you, my dear reader, explaining this. Converting enum to whatever will be stored in relational database and vice-versa. Theoretically JPA provider should apply converters automatically if they are declared with: @Converter(autoApply = true) It didn’t work for me. Moreover declaring them explicitly instead of @Enumerated in@Entity class didn’t work as well: import javax.persistence.Convert; //... @Convert(converter = CoverConverter.class) private Cover cover; Resulting in exception: Exception Description: The converter class [com.blogspot.nurkiewicz.CoverConverter] specified on the mapping attribute [cover] from the class [com.blogspot.nurkiewicz.Book] was not found. Please ensure the converter class name is correct and exists with the persistence unit definition. Bug or feature, I had to mention converter in orm.xml: And it flies! I have a freedom of modifying my Cover enum (adding, rearranging, renaming) without affecting existing records. One tip I would like to share with you is related to maintainability. Every time you have a piece of code mapping from or to enum, make sure it’s tested properly. And I don’t mean testing every possible existing value manually. I am more after a test making sure that newenum values are reflected in mapping code. Hint: code below will fail (by throwingIllegalArgumentException) if you add new enum value but forget to add mapping code from it: for (Cover cover : Cover.values()) { new CoverConverter().convertToDatabaseColumn(cover); } Custom converters in JPA 2.1 are much more useful than what we saw. If you combine JPA with Scala, you can use @Converter to map database columns directly toscala.math.BigDecimal, scala.Option or small case class. In Java there will finally be a portable way of mapping Joda time. Last but not least, if you like (very) strongly typed domain, you may wish to have PhoneNumber class (with isInternational(),getCountryCode() and custom validation logic) instead of String or long. This small addition in JPA 2.1 will surely improve domain objects quality significantly. If you wish to play a bit with this feature, sample Spring web application is available on GitHub.
June 6, 2013
by Tomasz Nurkiewicz
· 69,648 Views · 6 Likes
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Serialization and injection
Serialization is a form of persistence: serialized data survives the process and the RAM where it was created and can be reconstituted inside different processes and machines that live in a different time or place. Sometimes serialization is a poor form of persistence in fact, one that confuses the boundary between the different schemas the data can fit in. However, what I found useful in the last years of development is to institute a strict separation: serialize Value Objects, Entities, and everything that represents the state of the application. Meanwhile, use Dependency Injection over services that are part of a larger object graph and never serialize this second kind of objects. In the discussion that follows, I make the assumption that serialization and deserialization occur on the same machine (e.g. like for web-oriented sessions.) The problem with serialization, which work transparently most of the time, is the need to serialize service objects instead of limiting the procedure to data structures. How can you store such objects? Not options Some options to solve this problems are really not options. Serialization by itself will fail because of the staleness of the references contained in these objects. For example, in PHP trying to serialize a database connections composed by a Repository or DAO object will rightly fail with an exception. Whenever an object represents a resource of the current machine, it cannot usually be serialized except in the case when the only resource involved is RAM. If the resource is disk space or other running processes such as a database daemon, the reconstitution of the object in another place and time will fail and it's best to just stop the developer immediately during storage. Quasi-options Some solutions to the problem try to avoid the staleness problem by serializing objects without their resources, and make them regrab a new version of them on deserialization. In PHP for example, this can be done with the __sleep() and __wakeup() magic methods, called automatically during serialization and deserializaton respectively. This deserialization mechanism introduces a dependency from the serialized Entity to external services: such a dependency is already in place when building the object the first time (passing the XService in the constructor) but it is aggravated when deserializing (depending on a XServiceFactory instead of just an XService). An improvement, from the dependencies point of view, is to reattach collaborators to deserialized objects like you would for other persistence-related tasks. For example, EntityRepository can inject the missing pieces of Entity every time its find() method is called. However, there is still another option, which is the most resilient from the modelling point of view and not only that of dependency management: injecting non-serializable collaborators through the stack. Objects can collaborate even without keeping field references to each other, and injecting dependencies as parameters move the dependency starting point from the server to the client object (which may or may not be desirable). What is most important is that Entities are relieved of having to manage external references in any context, not only that of persistence and in particular serialization. The metaphor for the 3rd option Misko Hevery likes to say: have you ever seen a credit card able to charge itself? If a CreditCard is an Entity in your domain, it would be very strange to keeping a wire attached to your wallet wherever you go. With the first option, you have the card spring a wire when it is taken out of the wallet, like in horror movies. This intelligent cable tries as its best to attach to the nearest Point of Sale (a bad case of bluetooth I think). With Repositories in mind, you're not dealing with automated wires anymore, but you're still attaching cables between cards and fixed devices. In reality, cards collaborate with the PoS in a fast process that does not last more than a few seconds. Actually, sometimes they don't touch it at all, as in all Internet-based purchases. Keeping services around to deal with external dependencies does not mean the API of your Domain Model has to be biased towards service objects: pos.charge(creditCard); // can equivalently be: creditCard.chargeOn(pos); This is a form of Double Dispatch since there are two objects collaborating and you can dispatch (send messages) to both, being polimorphic by substituting both objects. The sequence of calls is: client -> creditCard -> pos The client object still looks at CreditCard as a behaviorally complete object, but it is clear which dependency is necessary to run each use case (CreditCard method). You can persist a CreditCard easily and send it over the wire to caches or databases. When it comes the time to charge, it is the client that has to bring forward a service able to connect to a bank.
June 5, 2013
by Giorgio Sironi
· 7,396 Views
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Write CSV Data into Hive and Python
Apache Hive is a high level SQL-like interface to Hadoop. It lets you execute mostly unadulterated SQL, like this: CREATE TABLE test_table(key string, stats map); The map column type is the only thing that doesn’t look like vanilla SQL here. Hive can actually use different backends for a given table. Map is used to interface with column oriented backends like HBase. Essentially, because we won’t know ahead of time all the column names that could be in the HBase table, Hive will just return them all as a key/value dictionary. There are then helpers to access individual columns by key, or even pivot the map into one key per logical row. As part of the Hadoop family, Hive is focused on bulk loading and processing. So it’s not a surprise that Hive does not support inserting raw values like the following SQL: INSERT INTO suppliers (supplier_id, supplier_name) VALUES (24553, 'IBM'); However, for unit testing Hive scripts, it would be nice to be able to insert a few records manually. Then you could run your map reduce HQL, and validate the output. Luckily, Hive can load CSV files, so it’s relatively easy to insert a handful or records that way. CREATE TABLE foobar(key string, stats map) ROW FORMAT DELIMITED FIELDS TERMINATED BY ',' COLLECTION ITEMS TERMINATED BY '|' MAP KEYS TERMINATED BY ':' ; LOAD DATA LOCAL INPATH '/tmp/foobar.csv' INTO TABLE foobar; This will load a CSV file with the following data, where c4ca4-0000001-79879483-000000000124 is the key, and comments and likesare columns in a map. c4ca4-0000001-79879483-000000000124,comments:0|likes:0 c4ca4-0000001-79879483-000000000124,comments:0|likes:0 Because I’ve been doing this quite a bit in my unit tests, I wrote a quick Python helper to dump a list of key/map tuples to a temporary CSV file, and then load it into Hive. This uses hiver to talk to Hive over thrift. import hiver from django.core.files.temp import NamedTemporaryFile def _hql(self, hql): client = hiver.connect(settings.HIVE_HOST, settings.HIVE_PORT) try: client.execute(hql) finally: client.shutdown() def insert(self, table_name, rows): ''' cannot insert single rows via hive, need to save to a temp file and bulk load that ''' csv_file = NamedTemporaryFile(delete=True) for row in rows: map_repr = '|'.join('%s:%s' % (key, value) for key, value in row[1].items()) csv_file.write(row[0] + "," + map_repr + "\n") csv_file.flush() try: _hql('DROP TABLE IF EXISTS %s' % table_name) _hql(""" CREATE TABLE %s ( key string, map ) ROW FORMAT DELIMITED FIELDS TERMINATED BY ',' COLLECTION ITEMS TERMINATED BY '|' MAP KEYS TERMINATED BY ':' """ % (table_name)) _hql(""" LOAD DATA LOCAL INPATH '%s' INTO TABLE %s """ % (csv_file.name, table_name) finally: csv_file.close() You can call it like this: insert('test_table', [ ('c4ca4-0000001-79879483-000000000124', {'comments': 1, 'likes': 2}), ('c4ca4-0000001-79879483-000000000124', {'comments': 1, 'likes': 2}), ('c4ca4-0000001-79879496-000000000124', {'comments': 1, 'likes': 2}), ('b4aed-0000002-79879783-000000000768', {'comments': 1, 'likes': 2}), ('b4aed-0000002-79879783-000000000768', {'comments': 1, 'likes': 2}), ])
June 5, 2013
by Chase Seibert
· 14,852 Views
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Hadoop REST API - WebHDFS
Hadoop provides a Java native API to support file system operations..
June 3, 2013
by Istvan Szegedi
· 57,618 Views · 5 Likes
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Build an Arduino Motor/Stepper/Servo Shield – Part 1: Servos
this post starts a small (or larger?) series of tutorials using the arduino motor/stepper/servo shield with the frdm-kl25z board. that motor shield is probably one of the most versatile on the market, and features 2 servo and 4 motor connectors for dc or stepper motors. that makes it a great shield for any robotic project arduino motor stepper servo shield with frdm-kl25z the series starts with a tutorial how to drive two servo motors. and if this is not what you are expecting to do with this shield, then you can vote and tell me what you want to see instead on this motor shield . oem or original? the original arduino motor/stepper/servo shield is available from adaftruit industries and costs less than $20. i’m using a oem version, see this link . the functionality is the same, except that the oem version only runs with motors up to 16 vdc, while the original shield is for motors up to 25 vdc. motor stepper servo shield details the board has two stmicroelectronics l293d motor h-bridge ic’s which can drive up to 4 dc motors (or up to 2 stepper motors) with 0.6 a per bridge (1.2 a peak). the 74hct595n (my board has the sn74hc595 from texas instrument) is a shift register used for the h-bridges to reduce the number of pins needed (more about this in a next post). a terminal block with jumper is providing power to the dc/stepper motor. the 5 vdc for the servos is taken from the frdm board. the frdm-kl25z can only give a few hundred ma on the 5v arduino header. that works for small servos, but i recommend to cut the 5v supply to the servos and use a dedicated 5v (or 6v) for the servos. outline in this tutorial, i’m creating a project with codewarrior for mcu10.4 for the frdm-kl25z board, and then add support for two servo motors. processor expert components this tutorial uses added processor expert components which are not part of codewarrior distribution. the following other components are used: wait : allows waiting for a given time servo : high level driver for hobby servp motors make sure you have the latest and greatest components loaded from github . instructions how to download and install the additional components can be found here . creating codewarrior project to create a new project in codewarrior: file > new > bareboard project, give a project name specify the device to be used: mkl25z128 opensda as connection i/o support can be set to ‘no i/o’ processor expert as rapid application development option this creates the starting point for my project: new servo project created servo motor servo motors are used in rc (radio control) or (hobby) robotics. typical servo motor (hitec hs-303) the motor has 3 connectors: gnd (black) power (red), typically 5v, but can be 6v or even higher pwm (white or yellow), signal for position information the pwm signal typically has frequency of 50 hz (20 ms), with a duty (high duration) between 1 ms and 2 ms. the screenshot below shows such a 50 hz signal with 1.5 ms duty cycle (servo middle position): servo signal many servos go below 1 ms and beyond 2 ms. e.g. many hitec servos have a range of 0.9…2.1 ms. check the data sheet of your servos for details. if you do not have a data sheet, then you might just experiment with different values. with a pwm duty of 1 ms to 2 ms within a 20 ms period, this means that only 10% of the whole pwm duty are used. this means if you have a pwm resolution of only 8bits, then only 10% of 256 steps could be used. as such, an 8bit pwm signal does not give me a fine tuned servo positioning. the duration of the duty cycle (1..2 ms) is translated into a motor position. typically the servo has a built-in closed-loop control with a microcontroller and a potentiometer. i have found that it is not important to have an *exact* 50 hz pwm frequency. you need to experiment with your servo if it works as well with a lower or higher frequency, or with non-fixed frequency (e.g. if you do a software pwm). many servos build an average of the duty cycle, so you might need to send several pulses until the servo reacts to a changed value. servo processor expert component i’m using here my own ‘servo’ component which offers following capabilities: pwm configuration (duty and period) min/max and initialization values methods to change the duty cycle optional command line shell support: you can type in commands and control the servo. this is useful for testing or calibration. optional ‘timed’ moving, so you can move the servo faster or slower to the new position in an interrupt driven way of course it is possible to use servos without any special components. from the components view, i add the servo component. to add it to my project, i can double-click on it or use the ‘+’ icon in that view: servo component in components library view in case the processor expert views are not shown, use the menu processor expert > show views this will add a new ‘servo’ component to the project: servo component added but it shows errors as first the pwm and pin settings need to be configured. pwm configuration on the arduino motor/stepper/servo shield the two servo motor headers are connected to pwm1b and pwm1a (see schematic ): servo header on board (source: dk electronics shield schematic) following the signals, this ends up at following pins on the kl25z: servo 1 => pwm1b => arduino header d10 => frdm-kl25z d10 => kl25z pin 73 => ptd0/spi0_pcs0/ tpm0_ch0 servo 2 => pwm1a => arduino header d9 => frdm-kl25z d9 => kl25z pin 78 => adc0_se6b/ptd5/spi1_sck/uart2_tx/ tpm0_ch5 from the pin names on the kinets (tpm0_ch0 and tpm0_ch5) i can see that this would be the same timer (tpm0), but with different channel numbers (ch0 and ch5). for my first servo processor expert has created for me a ‘timerunit_ldd’ which i will be able to share (later more on this). the timerunit_ldd implements the ‘ l ogical d evice d river’ for my pwm: timerunit_ldd so i select the pwm component inside the servo component and configure it for tpm0_c0v and the pin ptd0/spi0_pcs0/tpm0_ch0 with low initial polarity. the period of 20 ms (50 hz) and starting pulse with of 1.5 ms (mid-point) should already be pre-configured: servo1 pwm configuration i recommend to give it a pin signal name (i used ‘servo1′) that i need to set the ‘initial polarity’ to low is a bug of processor expert in my view: the device supports an initial ‘high’ polarity, but somehow this is not implemented? what it means is that the polarity of the pwm signal is now inverted: a ‘high’ duty cycle will mean that the signal is low. we need to ‘revert’ the logic later in the servo component. because of the inverted pwm logic, i need to set the ‘inverted pwm’ attribute in the servo component: inverted pwm the other settings of the servo component we can keep ‘as is’ for now. the ‘min pos pwm’ and ‘max pos pwm’ define the range of the pwm duty cycle which we will use later for the servo position. adding second servo as with the first servo, i add the second servo from the components library view. as i already have a timerunit_ldd present in my system, processor expert asks me if i want to re-use the existing one or to create a new component: shared component dialog as explained above: i can use the same timer (just a different pin/channel), so i have my existing component selected and press ok. as above, i configure the timer channel and pin with initial polarity: servo2 pwm configuration and i should not forget to enable the inverted logic: inverted pwm for servo2 test application time to try things out. for this i create a simple demo application which changes the position of both servos. first i add the wait component to the project from the components library: added wait component as i have all my processor expert components configured, i can generate the code: generating processor expert code next i add a new header application.h file to my project. for this i select the ‘sources’ folder of my project and use the new > header file context menu to add my new header file: new application.h in that header file application.h i add a prototype for my application ‘run’ routine: added app_run prototype from the main() in processorexpert.c , i call that function (not to forget to include the header file): calling app_run from main the same way i add a new source file application.c: new application.c to test my servos, i’m using the setpos() method which accepts a 8bit (0 to 255) value which is the position. to slow things a bit, i’m waiting a few milliseconds between the different positions: #include "application.h" #include "wait1.h" #include "servo1.h" #include "servo2.h" void app_run(void) { uint16_t pos; for(;;) { for(pos=0;pos<=255;pos++) { servo1_setpos(pos); servo2_setpos(pos); wait1_waitms(50); } } } save all files, and we should be ready to try it out on the board. build, download and run that’s it! time to build the project (menu project > build project ) and to download it with the debugger (menu run > debug ) and to start the application. if everything is going right, then the two servos will slowly turn in one direction until the end position, and then return back to the starting position. summary using hobby servo motors with the frdm-kl25z, codewarrior, processor expert and the additional components plus the arduino/stepper/servo shield is very easy in my view. i hope this post is useful to start your own experiments with hobby servo motors to bring any robotic project to the next level. i have here on github a project which features what is explained in this post, but with a lot more components, bells and whistles
June 2, 2013
by Erich Styger
· 18,034 Views · 7 Likes
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Avro's Built-In Sorting
avro has a little-known gem of a feature which allows you to control which fields in an avro record are used for partitioning , sorting and grouping in mapreduce. the following figure gives a quick refresher as to what these terms mean. oh, and don’t take the placement of the “sorting” literally - sorting actually occurs on both the map and reduce side - but it’s always performed in the context of a specific partition (i.e. for a specific reducer). by default all the fields in an avro map output key are used for partitioning, sorting and grouping in mapreduce. let’s walk through an example and see how this works. you’ll begin with a simple schema github source : {"type": "record", "name": "com.alexholmes.avro.weathernoignore", "doc": "a weather reading.", "fields": [ {"name": "station", "type": "string"}, {"name": "time", "type": "long"}, {"name": "temp", "type": "int"}, {"name": "counter", "type": "int", "default": 0} ] } we’re going to see what happens when we run this code against a small sample data set, which we’ll generate using avro code github source : file input = tmpfolder.newfile("input.txt"); avrofiles.createfile(input, weathernoignore.schema$, arrays.aslist( weathernoignore.newbuilder().setstation("sfo").settime(1).settemp(3).build(), weathernoignore.newbuilder().setstation("iad").settime(1).settemp(1).build(), weathernoignore.newbuilder().setstation("sfo").settime(2).settemp(1).build(), weathernoignore.newbuilder().setstation("sfo").settime(1).settemp(2).build(), weathernoignore.newbuilder().setstation("sfo").settime(1).settemp(1).build() ).toarray()); to understand how avro is partitioning, sorting and grouping the data, we’ll write an identity mapper and reducer, with a small enhancement to the reducer to increment the counter field for each record we see in an individual reducer instance github source : package com.alexholmes.avro.sort.basic; import com.alexholmes.avro.weathernoignore; import org.apache.avro.mapred.avrokey; import org.apache.avro.mapred.avrovalue; import org.apache.avro.mapreduce.avrojob; import org.apache.avro.mapreduce.avrokeyinputformat; import org.apache.avro.mapreduce.avrokeyoutputformat; import org.apache.hadoop.fs.path; import org.apache.hadoop.io.nullwritable; import org.apache.hadoop.mapreduce.job; import org.apache.hadoop.mapreduce.mapper; import org.apache.hadoop.mapreduce.reducer; import org.apache.hadoop.mapreduce.lib.input.fileinputformat; import org.apache.hadoop.mapreduce.lib.output.fileoutputformat; import java.io.ioexception; public class avrosort { private static class sortmapper extends mapper, nullwritable, avrokey, avrovalue> { @override protected void map(avrokey key, nullwritable value, context context) throws ioexception, interruptedexception { context.write(key, new avrovalue(key.datum())); } } private static class sortreducer extends reducer, avrovalue, avrokey, nullwritable> { @override protected void reduce(avrokey key, iterable> values, context context) throws ioexception, interruptedexception { int counter = 1; for (avrovalue weathernoignore : values) { weathernoignore.datum().setcounter(counter++); context.write(new avrokey(weathernoignore.datum()), nullwritable.get()); } } } public boolean runmapreduce(final job job, path inputpath, path outputpath) throws exception { fileinputformat.setinputpaths(job, inputpath); job.setinputformatclass(avrokeyinputformat.class); avrojob.setinputkeyschema(job, weathernoignore.schema$); job.setmapperclass(sortmapper.class); avrojob.setmapoutputkeyschema(job, weathernoignore.schema$); avrojob.setmapoutputvalueschema(job, weathernoignore.schema$); job.setreducerclass(sortreducer.class); avrojob.setoutputkeyschema(job, weathernoignore.schema$); job.setoutputformatclass(avrokeyoutputformat.class); fileoutputformat.setoutputpath(job, outputpath); return job.waitforcompletion(true); } } if you look at the output of the job below, you’ll see that the output is sorted across all the fields, and that the sorting is in field ordinal order. what this means is that when mapreduce is sorting these records, it compares the station field first, then the time field second, and so on according to the ordering of the fields in the avro schema. this is pretty much what you’d expect if you write your own complex writable type, and your comparator compared all the fields in order. {"station": "iad", "time": 1, "temp": 1, "counter": 1} {"station": "sfo", "time": 1, "temp": 1, "counter": 1} {"station": "sfo", "time": 1, "temp": 2, "counter": 1} {"station": "sfo", "time": 1, "temp": 3, "counter": 1} {"station": "sfo", "time": 2, "temp": 1, "counter": 1} oh, and before we move on notice that the value for the counter field is always 1 , meaning that each reducer was only fed a single key/vaue pair, which makes sense since our identity mapper only emitted a single value for each key, the keys are unique, and the mapreduce partitioner, sorter and grouper were using all the fields in the record. excluding fields for sorting avro gives us the ability to indicate that specific fields should be ignored when performing ordering functions. in mapreduce these fields are ignored for sorting/partitioning and grouping in mapreduce, which basically means that we have the ability to perform secondary sorting. let’s examine the following schema github source : {"type": "record", "name": "com.alexholmes.avro.weather", "doc": "a weather reading.", "fields": [ {"name": "station", "type": "string"}, {"name": "time", "type": "long"}, {"name": "temp", "type": "int", "order": "ignore"}, {"name": "counter", "type": "int", "order": "ignore", "default": 0} ] } it’s pretty much identical to the first schema, the only difference being that the last two fields are flagged as being “ignored” for sorting/partitioning/grouping. let’s run the same (other than modified to work with the different schema) mapreduce code github source as above against this new schema and examine the outputs. {"station": "iad", "time": 1, "temp": 1, "counter": 1} {"station": "sfo", "time": 1, "temp": 3, "counter": 1} {"station": "sfo", "time": 1, "temp": 2, "counter": 2} {"station": "sfo", "time": 1, "temp": 1, "counter": 3} {"station": "sfo", "time": 2, "temp": 1, "counter": 1} there are a couple of notable differences between this output, and the output from the previous schema which didn’t have any ignored fields. first, it’s clear that the temp field isn’t being used in the sorting, which makes sense since we specified that it should be ignored in the schema. however, more interestingly, note the value of the counter field. all records that had identical station and time values went to the same reducer invocation, evidenced by the increasing value of counter . this is essentially secondary sort! now, all of this greatness isn’t without some limitations: you can’t support two mapreduce jobs that use the same avro key, but have different sorting/partitioning/grouping requirements. although it’s conceivable that you could create a new instance of the avro schema and set the ignored flags for these fields yourself. the partitioner, sorter and grouping functions in mapreduce all work off of the same fields (i.e. they all ignore fields that set as ignored in the schema). this means that your options for secondary sorting are limited. for example, you wouldn’t be able to partition all stations to the same reducer, and then group by station and time. ordering uses a field’s ordinal position to determine its order within the overall set of fields to be ordered. in other words, in a two-field record, the first field is always compared before the second. there’s no way to change this behavior other than flipping the order of the fields in the record. having said all of that - the “ignoring fields” feature for sorting is pretty awesome, and something that will no doubt come in handy in my future mapreduce work.
May 29, 2013
by Alex Holmes
· 8,268 Views
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Accessing An Artifact’s Maven And SCM Versions At Runtime
You can easily tell Maven to include the version of the artifact and its Git/SVN/… revision in the JAR manifest file and then access that information at runtime via getClass().getPackage.getImplementationVersion(). (All credit goes to Markus Krüger and other colleagues.) Include Maven artifact version in the manifest (Note: You will actually not want to use it, if you also want to include a SCM revision; see below.) pom.xml: ... org.apache.maven.plugins maven-jar-plugin ... true true ... ... The resulting MANIFEST.MF of the JAR file will then include the following entries, with values from the indicated properties: Built-By: ${user.name} Build-Jdk: ${java.version} Specification-Title: ${project.name} Specification-Version: ${project.version} Specification-Vendor: ${project.organization.name Implementation-Title: ${project.name} Implementation-Version: ${project.version} Implementation-Vendor-Id: ${project.groupId} Implementation-Vendor: ${project.organization.name} (Specification-Vendor and Implementation-Vendor come from the POM’s organization/name.) Include SCM revision For this you can either use the Build Number Maven plugin that produces the property ${buildNumber}, or retrieve it from environment variables passed by Jenkinsor Hudson (SVN_REVISION for Subversion, GIT_COMMIT for Git). For git alone, you could also use the maven-git-commit-id-plugin that can either replace strings such as ${git.commit.id} in existing resource files (using maven’s resource filtering, which you must enable) with the actual values or output all of them into a git.properties file. Let’s use the buildnumber-maven-plugin and create the manifest entries explicitely, containing the build number (i.e. revision) org.codehaus.mojo buildnumber-maven-plugin 1.2 validate create false false org.apache.maven.plugins maven-jar-plugin 2.4 ${project.name} ${project.version} ${buildNumber} ... Accessing the version & revision As mentioned above, you can access the manifest entries from your code via getClass().getPackage.getImplementationVersion() andgetClass().getPackage.getImplementationTitle(). References SO: How to get Maven Artifact version at runtime? Maven Archiver documentation
May 28, 2013
by Jakub Holý
· 12,760 Views
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