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The Latest Java Topics

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Testing Databases with JUnit and Hibernate Part 1: One to Rule them
There is little support for testing the database of your enterprise application. We will describe some problems and possible solutions based on Hibernate and JUnit.
September 6, 2011
by Jens Schauder
· 123,278 Views · 2 Likes
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NTLM Authentication in Java
In one of my previous lives, I used to work in Microsoft and there this word – NTLM (NT Lan Manager) was something that came to us whenever we used to work on applications. Microsoft OS have always provided us with an inbuilt security systems that can be effectively used to offer authentication (and even authorization to web applications). Many years back, I moved over into Java world and when I was asked to carry out my very first security implementation, I realized that there was no easy way to do this and many clients would actually want us to use LDAP for authentication and authorization. For many years, I continued to use that. And, then one day in a discussion with a client, we were asked to offer SSO implementation and client did not have an existing setup like SiteMinder. I started to think about if we can go about using NTLM based authentication. The reason that was possible was because the application we were asked to build was to be used within the organization itself and all the people were required to login into a domain. After some research, I was able to find out a way we could do this. We did a POC and showed it to the client and they were happy about it. What we did has been explained below: Wrote a Servlet which was the first one to be loaded (like Authentication Interceptor). This servlet was responsible for reading the header attributes and identify the user’s Domain and NTID Once we had the details; we sent a request to our Database to see if that user is registered under the same domain/NTID If the user was found in our user-database we allowed him to pass through And then roles and authorization for user was loaded Basically, we bypassed the “Login Screen” where the user was entering the password and used Domain information. Please note that it was possible for us because the Client guaranteed that there was this domain always and all users had unique NTIDs. Also, that it was their responsibility to shield the application from any external entry points where someone may impersonate the Domain/ID. If you are interested, you can refer to the code below: From http://scrtchpad.wordpress.com/2011/08/04/ntml-authentication-in-java/
September 1, 2011
by Kapil Viren Ahuja
· 52,328 Views · 2 Likes
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Java NIO vs. IO
when studying both the java nio and io api's, a question quickly pops into mind: when should i use io and when should i use nio? in this text i will try to shed some light on the differences between java nio and io, their use cases, and how they affect the design of your code. main differences of java nio and io the table below summarizes the main differences between java nio and io. i will get into more detail about each difference in the sections following the table. io nio stream oriented buffer oriented blocking io non blocking io selectors stream oriented vs. buffer oriented the first big difference between java nio and io is that io is stream oriented, where nio is buffer oriented. so, what does that mean? java io being stream oriented means that you read one or more bytes at a time, from a stream. what you do with the read bytes is up to you. they are not cached anywhere. furthermore, you cannot move forth and back in the data in a stream. if you need to move forth and back in the data read from a stream, you will need to cache it in a buffer first. java nio's buffer oriented approach is slightly different. data is read into a buffer from which it is later processed. you can move forth and back in the buffer as you need to. this gives you a bit more flexibility during processing. however, you also need to check if the buffer contains all the data you need in order to fully process it. and, you need to make sure that when reading more data into the buffer, you do not overwrite data in the buffer you have not yet processed. blocking vs. non-blocking io java io's various streams are blocking. that means, that when a thread invokes a read() or write(), that thread is blocked until there is some data to read, or the data is fully written. the thread can do nothing else in the meantime. java nio's non-blocking mode enables a thread to request reading data from a channel, and only get what is currently available, or nothing at all, if no data is currently available. rather than remain blocked until data becomes available for reading, the thread can go on with something else. the same is true for non-blocking writing. a thread can request that some data be written to a channel, but not wait for it to be fully written. the thread can then go on and do something else in the mean time. what threads spend their idle time on when not blocked in io calls, is usually performing io on other channels in the meantime. that is, a single thread can now manage multiple channels of input and output. selectors java nio's selectors allow a single thread to monitor multiple channels of input. you can register multiple channels with a selector, then use a single thread to "select" the channels that have input available for processing, or select the channels that are ready for writing. this selector mechanism makes it easy for a single thread to manage multiple channels. how nio and io influences application design whether you choose nio or io as your io toolkit may impact the following aspects of your application design: the api calls to the nio or io classes. the processing of data. the number of thread used to process the data. the api calls of course the api calls when using nio look different than when using io. this is no surprise. rather than just read the data byte for byte from e.g. an inputstream, the data must first be read into a buffer, and then be processed from there. the processing of data the processing of the data is also affected when using a pure nio design, vs. an io design. in an io design you read the data byte for byte from an inputstream or a reader. imagine you were processing a stream of line based textual data. for instance: name: anna age: 25 email: [email protected] phone: 1234567890 this stream of text lines could be processed like this: inputstream input = ... ; // get the inputstream from the client socket bufferedreader reader = new bufferedreader(new inputstreamreader(input)); string nameline = reader.readline(); string ageline = reader.readline(); string emailline = reader.readline(); string phoneline = reader.readline(); notice how the processing state is determined by how far the program has executed. in other words, once the first reader.readline() method returns, you know for sure that a full line of text has been read. the readline() blocks until a full line is read, that's why. you also know that this line contains the name. similarly, when the second readline() call returns, you know that this line contains the age etc. as you can see, the program progresses only when there is new data to read, and for each step you know what that data is. once the executing thread have progressed past reading a certain piece of data in the code, the thread is not going backwards in the data (mostly not). this principle is also illustrated in this diagram: java io: reading data from a blocking stream. a nio implementation would look different. here is a simplified example: bytebuffer buffer = bytebuffer.allocate(48); int bytesread = inchannel.read(buffer); notice the second line which reads bytes from the channel into the bytebuffer. when that method call returns you don't know if all the data you need is inside the buffer. all you know is that the buffer contains some bytes. this makes processing somewhat harder. imagine if, after the first read(buffer) call, that all what was read into the buffer was half a line. for instance, "name: an". can you process that data? not really. you need to wait until at leas a full line of data has been into the buffer, before it makes sense to process any of the data at all. so how do you know if the buffer contains enough data for it to make sense to be processed? well, you don't. the only way to find out, is to look at the data in the buffer. the result is, that you may have to inspect the data in the buffer several times before you know if all the data is inthere. this is both inefficient, and can become messy in terms of program design. for instance: bytebuffer buffer = bytebuffer.allocate(48); int bytesread = inchannel.read(buffer); while(! bufferfull(bytesread) ) { bytesread = inchannel.read(buffer); } the bufferfull() method has to keep track of how much data is read into the buffer, and return either true or false, depending on whether the buffer is full. in other words, if the buffer is ready for processing, it is considered full. the bufferfull() method scans through the buffer, but must leave the buffer in the same state as before the bufferfull() method was called. if not, the next data read into the buffer might not be read in at the correct location. this is not impossible, but it is yet another issue to watch out for. if the buffer is full, it can be processed. if it is not full, you might be able to partially process whatever data is there, if that makes sense in your particular case. in many cases it doesn't. the is-data-in-buffer-ready loop is illustrated in this diagram: java nio: reading data from a channel until all needed data is in buffer. summary nio allows you to manage multiple channels (network connections or files) using only a single (or few) threads, but the cost is that parsing the data might be somewhat more complicated than when reading data from a blocking stream. if you need to manage thousands of open connections simultanously, which each only send a little data, for instance a chat server, implementing the server in nio is probably an advantage. similarly, if you need to keep a lot of open connections to other computers, e.g. in a p2p network, using a single thread to manage all of your outbound connections might be an advantage. this one thread, multiple connections design is illustrated in this diagram: java nio: a single thread managing multiple connections. if you have fewer connections with very high bandwidth, sending a lot of data at a time, perhaps a classic io server implementation might be the best fit. this diagram illustrates a classic io server design: java io: a classic io server design - one connection handled by one thread. from http://tutorials.jenkov.com/java-nio/nio-vs-io.html
August 28, 2011
by Jakob Jenkov
· 134,277 Views · 19 Likes
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Clojure: partition-by, split-with, group-by, and juxt
Today I ran into a common situation: I needed to split a list into 2 sublists - elements that passed a predicate and elements that failed a predicate. I'm sure I've run into this problem several times, but it's been awhile and I'd forgotten what options were available to me. A quick look at http://clojure.github.com/clojure/ reveals several potential functions: partition-by, split-with, and group-by. partition-by From the docs: Usage: (partition-by f coll) Applies f to each value in coll, splitting it each time f returns a new value. Returns a lazy seq of partitions. Let's assume we have a collection of ints and we want to split them into a list of evens and a list of odds. The following REPL session shows the result of calling partition-by with our list of ints. user=> (partition-by even? [1 2 4 3 5 6]) ((1) (2 4) (3 5) (6)) The partition-by function works as described; unfortunately, it's not exactly what I'm looking for. I need a function that returns ((1 3 5) (2 4 6)). split-with From the docs: Usage: (split-with pred coll) Returns a vector of [(take-while pred coll) (drop-while pred coll)] The split-with function sounds promising, but a quick REPL session shows it's not what we're looking for. user=> (split-with even? [1 2 4 3 5 6]) [() (1 2 4 3 5 6)] As the docs state, the collection is split on the first item that fails the predicate - (even? 1). group-by From the docs: Usage: (group-by f coll) Returns a map of the elements of coll keyed by the result of f on each element. The value at each key will be a vector of the corresponding elements, in the order they appeared in coll. The group-by function works, but it gives us a bit more than we're looking for. user=> (group-by even? [1 2 4 3 5 6]) {false [1 3 5], true [2 4 6]} The result as a map isn't exactly what we desire, but using a bit of destructuring allows us to grab the values we're looking for. user=> (let [{evens true odds false} (group-by even? [1 2 4 3 5 6])] [evens odds]) [[2 4 6] [1 3 5]] The group-by results mixed with destructuring do the trick, but there's another option. juxt From the docs: Usage: (juxt f) (juxt f g) (juxt f g h) (juxt f g h & fs) Alpha - name subject to change. Takes a set of functions and returns a fn that is the juxtaposition of those fns. The returned fn takes a variable number of args, and returns a vector containing the result of applying each fn to the args (left-to-right). ((juxt a b c) x) => [(a x) (b x) (c x)] The first time I ran into juxt I found it a bit intimidating. I couldn't tell you why, but if you feel the same way - don't feel bad. It turns out, juxt is exactly what we're looking for. The following REPL session shows how to combine juxt with filter and remove to produce the desired results. user=> ((juxt filter remove) even? [1 2 4 3 5 6]) [(2 4 6) (1 3 5)] There's one catch to using juxt in this way, the entire list is processed with filter and remove. In general this is acceptable; however, it's something worth considering when writing performance sensitive code. From http://blog.jayfields.com/2011/08/clojure-partition-by-split-with-group.html
August 24, 2011
by Jay Fields
· 13,341 Views
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Avoiding Java Serialization to increase performance
Many frameworks for storing objects in an off-line or cached manner, use standard Java Serialization to encode the object as bytes which can be turned back into the original object. Java Serialization is generic and can serialise just about any type of object. Why avoid it The main problem with Java Serialization is performance and efficiency. Java serialization is much slower than using in memory stores and tends to significantly expand the size of the object. Java Serialization also creates a lot of garbage. Access performance Say you have a collection and you want to update a field of many elements. Something like for (MutableTypes mt : mts) { mt.setInt(mt.getInt()); } If you update one million elements for about five seconds how long does each one take. Huge Collection update one field, took an average 5.1 ns. List update one field took an average 6.5 ns. List with Externalizable update one field took an average 5,841 ns. List update one field took an average 23,217 ns. If you update ten million elements for five seconds or more Huge Collection update one field, took an average 5.4 ns. List, update one field took an average 6.6 ns. List with readObject/writeObject update one field took an average 6,073 ns. List update one field took an average 22,943 ns. Huge Collection stores information in a column based based, so accessing just one field is much more CPU cache efficient than using JavaBeans. If you were to update every field, it would be about 2x or more times slower. Using an optimised Externalizable is much faster than the default Serializable, however is it 400x slower than using a a JavaBean Memory efficiency The per object memory used is also important as it impacts how many object you can store and the performance of accessing those objects. Collection type Heap used per million Direct memory per million Garbage produced per million Huge Collection 0.09 MB 34 MB 80 bytes List 68 MB none 30 bytes List using Externalizable 140 MB none 5,941 MB List 506 MB none 16,746 MB This test was performed on a collection of one million elements. To test the amount of garbage produced I set the Eden size target than 15 GB so no GC would be performed. -mx22g -XX:NewSize=20g -XX:-UseTLAB -verbosegc Conclusion Having an optimised readExternal/writeExternal can improve performance and the size of a serialised object by 2-4 times, however if you need to maximise performance and efficiency you can gain much more by not using it. From http://vanillajava.blogspot.com/2011/08/avoiding-java-serialization-to-increase.html
August 20, 2011
by Peter Lawrey
· 26,507 Views
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Attaching Java source with Eclipse IDE
In Eclipse, when you press Ctrl button and click on any Class names, the IDE will take you to the source file for that class. This is the normal behavior for the classes you have in your project. But, in case you want the same behavior for Java’s core classes too, you can have it by attaching the Java source with the Eclipse IDE. Once you attach the source, thereafter when you Ctrl+Click any Java class names (String for example), Eclipse will open the source code of that class. To attach the Java source code with Eclipse, When you install the JDK, you must have selected the option to install the Java source files too. This will copy the src.zip file in the installation directory. In Eclipse, go to Window -> Preferences -> Java -> Installed JREs -> Add and choose the JDK you have in your system. Eclipse will now list the JARs found in the dialog box. There, select the rt.jar and choose Source Attachment. By default, this will be pointing to the correct src.zip. If not, choose the src.zip file which you have in your java installation directory. Similarly, if you have the javadoc downloaded in your machine, you can configure that too in this dialog box. Done! Here after, for all the projects for which you are using the above JDK, you’ll be able to browse the Java’s source code just like how you browse your own code. From http://veerasundar.com/blog/2011/08/attaching-java-source-with-eclipse-ide
August 18, 2011
by Veera Sundar
· 143,586 Views · 4 Likes
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REST JSON to SOAP conversion tutorial
i often get asked about ‘rest to soap’ transformation use cases these days. using an soa gateway like securespan to perform this type of transformation at runtime is trivial to setup. with securespan in front of any existing web service (in the dmz for example), you can virtualize a rest version of this same service. using an example, here is a description of the steps to perform this conversion. imagine the geoloc web service for recording geographical locations. it has two methods, one for setting a location and one for getting a location. see below what this would look like in soap. request: 34802398402 response: 52.37706 4.889721 request: 34802398402 52.37706 4.889721 response: ok here is the equivalent rest target that i want to support at the edge. payloads could be xml, but let’s use json to make it more interesting. get /position/34802398402 http 200 ok content-type: text/json { 'latitude' : 52.37706 'longitude' : 4.889721 } post /position/34802398402 content-type: text/json { 'latitude' : 52.37706 'longitude' : 4.889721 } http 200 ok ok now let’s implement this rest version of the service using securespan. i’m assuming that you already have a securespan gateway deployed between the potential rest requesters and the existing soap web service. first, i will create a new service endpoint on the gateway for this service and assign anything that comes at the uri pattern /position/* to this service. i will also allow the http verbs get and post for this service. rest geoloc service properties next, let’s isolate the resource id from the uri and save this as a context variable named ‘trackerid’. we can use a simple regex assertion to accomplish this. also, i will branch on the incoming http verb using an or statement. i am just focusing on get and post for this example but you could add additional logic for other http verbs that you want to support for this rest service. regex for rest service resource identification policy branching for get vs post for get requests, the transformation is very simple, we just declare a message variable using a soap skeleton into which we refer to the trackerid variable. soap request template this soap message is routed to the existing web service and the essential elements are isolated using xpath assertions. processing soap response the rest response is then constructed back using a template response. template json response a similar logic is performed for the post message. see below for the full policy logic. complete policy you’re done for virtualizing the rest service. setting this up with securespan took less than an hour, did not require any change on the existing soap web service and did not require the deployment of an additional component. from there, you would probably enrich the policy to perform some json schema validation , some url and query parameter validation, perhaps some authentication, authorization , etc.
August 4, 2011
by Francois Lascelles
· 37,796 Views
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Java Tools for Source Code Optimization and Analysis
Below is a list of some tools that can help you examine your Java source code for potential problems: 1. PMD from http://pmd.sourceforge.net/ License: PMD is licensed under a “BSD-style” license PMD scans Java source code and looks for potential problems like: * Possible bugs – empty try/catch/finally/switch statements * Dead code – unused local variables, parameters and private methods * Suboptimal code – wasteful String/StringBuffer usage * Overcomplicated expressions – unnecessary if statements, for loops that could be while loops * Duplicate code – copied/pasted code means copied/pasted bugs You can download everything from here, and you can get an overview of all the rules at the rulesets index page. PMD is integrated with JDeveloper, Eclipse, JEdit, JBuilder, BlueJ, CodeGuide, NetBeans/Sun Java Studio Enterprise/Creator, IntelliJ IDEA, TextPad, Maven, Ant, Gel, JCreator, and Emacs. 2. FindBug from http://findbugs.sourceforge.net License: L-GPL FindBugs, a program which uses static analysis to look for bugs in Java code. And since this is a project from my alumni university (IEEE – University of Maryland, College Park – Bill Pugh) , I have to definitely add this contribution to this list. 3. Clover from http://www.cenqua.com/clover/ License: Free for Open Source (more like a GPL) Measures statement, method, and branch coverage and has XML, HTML, and GUI reporting. and comprehensive plug-ins for major IDEs. * Improve Test Quality * Increase Testing Productivity * Keep Team on Track Fully integrated plugins for NetBeans, Eclipse , IntelliJ IDEA, JBuilder and JDeveloper. These plugins allow you to measure and inspect coverage results without leaving the IDE. Seamless Integration with projects using Apache Ant and Maven. * Easy integration into legacy build systems with command line interface and API. Fast, accurate, configurable, detailed coverage reporting of Method, Statement, and Branch coverage. Rich reporting in HTML, PDF, XML or a Swing GUI Precise control over the coverage gathering with source-level filtering. Historical charting of code coverage and other metrics. Fully compatible with JUnit 3.x & 4.x, TestNG, JTiger and other testing frameworks. Can also be used with manual, functional or integration testing. 4. Macker from http://innig.net/macker/ License: GPL Macker is a build-time architectural rule checking utility for Java developers. It’s meant to model the architectural ideals programmers always dream up for their projects, and then break — it helps keep code clean and consistent. You can tailor a rules file to suit a specific project’s structure, or write some general “good practice” rules for your code. Macker doesn’t try to shove anybody else’s rules down your throat; it’s flexible, and writing a rules file is part of the development process for each unique project. 5 EMMA from http://emma.sourceforge.net/ License: EMMA is distributed under the terms of Common Public License v1.0 and is thus free for both open-source and commercial development. Reports on class, method, basic block, and line coverage (text, HTML, and XML). EMMA can instrument classes for coverage either offline (before they are loaded) or on the fly (using an instrumenting application classloader). Supported coverage types: class, method, line, basic block. EMMA can detect when a single source code line is covered only partially. Coverage stats are aggregated at method, class, package, and “all classes” levels. Output report types: plain text, HTML, XML. All report types support drill-down, to a user-controlled detail depth. The HTML report supports source code linking. Output reports can highlight items with coverage levels below user-provided thresholds. Coverage data obtained in different instrumentation or test runs can be merged together. EMMA does not require access to the source code and degrades gracefully with decreasing amount of debug information available in the input classes. EMMA can instrument individial .class files or entire .jars (in place, if desired). Efficient coverage subset filtering is possible, too. Makefile and ANT build integration are supported on equal footing. EMMA is quite fast: the runtime overhead of added instrumentation is small (5-20%) and the bytecode instrumentor itself is very fast (mostly limited by file I/O speed). Memory overhead is a few hundred bytes per Java class. EMMA is 100% pure Java, has no external library dependencies, and works in any Java 2 JVM (even 1.2.x). 6. XRadar from http://xradar.sourceforge.net/ License: BSD (me thinks) The XRadar is an open extensible code report tool currently supporting all Java based systems. The batch-processing framework produces HTML/SVG reports of the systems current state and the development over time – all presented in sexy tables and graphs. The XRadar gives measurements on standard software metrics such as package metrics and dependencies, code size and complexity, code duplications, coding violations and code-style violations. 7. Hammurapi from Hammurapi Group License: (if anyone knows the license for this email me Venkatt.Guhesan at Y! dot com) Hammurapi is a tool for execution of automated inspection of Java program code. Following the example of 282 rules of Hammurabi’s code, we are offered over 120 Java classes, the so-called inspectors, which can, at three levels (source code, packages, repository of Java files), state whether the analysed source code contains violations of commonly accepted standards of coding. Relevant Links: http://en.sdjournal.org/products/articleInfo/93 http://wiki.hammurapi.biz/index.php?title=Hammurapi_4_Quick_Start 8. Relief from http://www.workingfrog.org/ License: GPL Relief is a design tool providing a new look on Java projects. Relying on our ability to deal with real objects by examining their shape, size or relative place in space it gives a “physical” view on java packages, types and fields and their relationships, making them easier to handle. 9. Hudson from http://hudson-ci.org/ License: MIT Hudson is a continuous integration (CI) tool written in Java, which runs in a servlet container, such as Apache Tomcat or the GlassFish application server. It supports SCM tools including CVS, Subversion, Git and Clearcase and can execute Apache Ant and Apache Maven based projects, as well as arbitrary shell scripts and Windows batch commands. 10. Cobertura from http://cobertura.sourceforge.net/ License: GNU GPL Cobertura is a free Java tool that calculates the percentage of code accessed by tests. It can be used to identify which parts of your Java program are lacking test coverage. It is based on jcoverage. 11. SonarSource from http://www.sonarsource.org/ (recommended by Vishwanath Krishnamurthi – thanks) License: LGPL Sonar is an open platform to manage code quality. As such, it covers the 7 axes of code quality: Architecture & Design, Duplications, Unit Tests, Complexity, Potential bugs, Coding rules, Comments. From http://mythinkpond.wordpress.com/2011/07/14/java-tools-for-source-code-optimization-and-analysis/
July 29, 2011
by Venkatt Guhesan
· 65,078 Views
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Java: What is the Limit to the Number of Threads You Can Create?
I have seen a number of tests where a JVM has 10K threads. However, what happens if you go beyond this? My recommendation is to consider having more servers once your total reaches 10K. You can get a decent server for $2K and a powerful one for $10K. Creating threads gets slower The time it takes to create a thread increases as you create more thread. For the 32-bit JVM, the stack size appears to limit the number of threads you can create. This may be due to the limited address space. In any case, the memory used by each thread's stack add up. If you have a stack of 128KB and you have 20K threads it will use 2.5 GB of virtual memory. Bitness Stack Size Max threads 32-bit 64K 32,073 32-bit 128K 20,549 32-bit 256K 11,216 64-bit 64K stack too small 64-bit 128K 32,072 64-bit 512K 32,072 Note: in the last case, the thread stacks total 16 GB of virtual memory. Java 6 update 26 32-bit,-XX:ThreadStackSize=64 4,000 threads: Time to create 4,000 threads was 0.522 seconds 8,000 threads: Time to create 4,000 threads was 1.281 seconds 12,000 threads: Time to create 4,000 threads was 1.874 seconds 16,000 threads: Time to create 4,000 threads was 2.725 seconds 20,000 threads: Time to create 4,000 threads was 3.333 seconds 24,000 threads: Time to create 4,000 threads was 4.151 seconds 28,000 threads: Time to create 4,000 threads was 5.293 seconds 32,000 threads: Time to create 4,000 threads was 6.636 seconds After creating 32,073 threads, java.lang.OutOfMemoryError: unable to create new native thread at java.lang.Thread.start0(Native Method) at java.lang.Thread.start(Thread.java:640) at com.google.code.java.core.threads.MaxThreadsMain.addThread(MaxThreadsMain.java:46) at com.google.code.java.core.threads.MaxThreadsMain.main(MaxThreadsMain.java:16) Java 6 update 26 32-bit,-XX:ThreadStackSize=128 4,000 threads: Time to create 4,000 threads was 0.525 seconds 8,000 threads: Time to create 4,000 threads was 1.239 seconds 12,000 threads: Time to create 4,000 threads was 1.902 seconds 16,000 threads: Time to create 4,000 threads was 2.529 seconds 20,000 threads: Time to create 4,000 threads was 3.165 seconds After creating 20,549 threads, java.lang.OutOfMemoryError: unable to create new native thread at java.lang.Thread.start0(Native Method) at java.lang.Thread.start(Thread.java:640) at com.google.code.java.core.threads.MaxThreadsMain.addThread(MaxThreadsMain.java:46) at com.google.code.java.core.threads.MaxThreadsMain.main(MaxThreadsMain.java:16) Java 6 update 26 32-bit,-XX:ThreadStackSize=128 4,000 threads: Time to create 4,000 threads was 0.526 seconds 8,000 threads: Time to create 4,000 threads was 1.212 seconds After creating 11,216 threads, java.lang.OutOfMemoryError: unable to create new native thread at java.lang.Thread.start0(Native Method) at java.lang.Thread.start(Thread.java:640) at com.google.code.java.core.threads.MaxThreadsMain.addThread(MaxThreadsMain.java:46) at com.google.code.java.core.threads.MaxThreadsMain.main(MaxThreadsMain.java:16) Java 6 update 26 64-bit,-XX:ThreadStackSize=128 4,000 threads: Time to create 4,000 threads was 0.577 seconds 8,000 threads: Time to create 4,000 threads was 1.292 seconds 12,000 threads: Time to create 4,000 threads was 1.995 seconds 16,000 threads: Time to create 4,000 threads was 2.653 seconds 20,000 threads: Time to create 4,000 threads was 3.456 seconds 24,000 threads: Time to create 4,000 threads was 4.663 seconds 28,000 threads: Time to create 4,000 threads was 5.818 seconds 32,000 threads: Time to create 4,000 threads was 6.792 seconds After creating 32,072 threads, java.lang.OutOfMemoryError: unable to create new native thread at java.lang.Thread.start0(Native Method) at java.lang.Thread.start(Thread.java:640) at com.google.code.java.core.threads.MaxThreadsMain.addThread(MaxThreadsMain.java:46) at com.google.code.java.core.threads.MaxThreadsMain.main(MaxThreadsMain.java:16) Java 6 update 26 64-bit,-XX:ThreadStackSize=512 4,000 threads: Time to create 4,000 threads was 0.577 seconds 8,000 threads: Time to create 4,000 threads was 1.292 seconds 12,000 threads: Time to create 4,000 threads was 1.995 seconds 16,000 threads: Time to create 4,000 threads was 2.653 seconds 20,000 threads: Time to create 4,000 threads was 3.456 seconds 24,000 threads: Time to create 4,000 threads was 4.663 seconds 28,000 threads: Time to create 4,000 threads was 5.818 seconds 32,000 threads: Time to create 4,000 threads was 6.792 seconds After creating 32,072 threads, java.lang.OutOfMemoryError: unable to create new native thread at java.lang.Thread.start0(Native Method) at java.lang.Thread.start(Thread.java:640) at com.google.code.java.core.threads.MaxThreadsMain.addThread(MaxThreadsMain.java:46) at com.google.code.java.core.threads.MaxThreadsMain.main(MaxThreadsMain.java:16) The Code MaxThreadsMain.java From http://vanillajava.blogspot.com/2011/07/java-what-is-limit-to-number-of-threads.html
July 26, 2011
by Peter Lawrey
· 148,752 Views · 1 Like
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Five reasons why you should rejoice about Kotlin
As you probably saw by now, JetBrains just announced that they are working on a brand new statically typed JVM language called Kotlin. I am planning to write a post to evaluate how Kotlin compares to the other existing languages, but first, I’d like to take a slightly different angle and try to answer a question I have already seen asked several times: what’s the point? We already have quite a few JVM languages, do we need any more? Here are a few reasons that come to mind. 1) Coolness New languages are exciting! They really are. I’m always looking forward to learning new languages. The more foreign they are, the more curious I am, but the languages I really look forward to discovering are the ones that are close to what I already know but not identical, just to find out what they did differently that I didn’t think of. Allow me to make a small digression in order to clarify my point. Some time ago, I started learning Japanese and it turned out to be the hardest and, more importantly, the most foreign natural language I ever studied. Everything is different from what I’m used to in Japanese. It’s not just that the grammar, the syntax and the alphabets are odd, it’s that they came up with things that I didn’t even think would make any sense. For example, in English (and many other languages), numbers are pretty straightforward and unique: one bag, two cars, three tickets, etc… Now, did it ever occur to you that a language could allow several words to mean “one”, and “two”, and “three”, etc…? And that these words are actually not arbitrary, their usage follows some very specific rules. What could these rules be? Well, in Japanese, what governs the word that you pick is… the shape of the object that you are counting. That’s right, you will use a different way to count if the object is long, flat, a liquid or a building. Mind-boggling, isn’t it? Here is another quick example: in Russian, each verb exists in two different forms, which I’ll call A and B to simplify. Russian doesn’t have a future tense, so when you want to speak at the present tense, you’ll conjugate verb A in the present, and when you want the future, you will use the B form… in the present tense. It’s not just that you need to learn two verbs per verb, you also need to know which one is which if you want to get your tenses right. Oh and these forms also have different meanings when you conjugate them in past tenses. End of digression. The reason why I am mentioning this is because this kind of construct bends your mind, and this goes for natural languages as much as programming languages. It’s tremendously exciting to read new syntaxes this way. For that reason alone, the arrival of new languages should be applauded and welcome. Kotlin comes with a few interesting syntactic innovations of its own, which I’ll try to cover in a separate post, but for now, I’d like to come back to my original point, which was to give you reasons why you should be excited about Kotlin, so let’s keep going down the list. 2) IDE support None of the existing JVM languages (Groovy, Scala, Fantom, Gosu, Ceylon) have really focused much on the tooling aspect. IDE plug-ins exist for each of them, all with varying quality, but they are all an afterthought, and they suffer from this oversight. The plug-ins are very slow to mature, they have to keep up with the internals of a compiler that’s always evolving and which, very often, doesn’t have much regards for the tools built on top of it. It’s a painful and frustrating process for tool creators and tool users alike. With Kotlin, we have good reasons to think that the IDE support will be top notch. JetBrains is basically announcing that they are building the compiler and the IDEA support in lockstep, which is a great way to guarantee that the language will work tremendously well inside IDEA, but also that other tools should integrate nicely with it as well (I’m rooting for a speedy Eclipse plug-in, obviously). 3) Reified generics This is a pretty big deal. Not so much for the functionality (I’ll get back to this in the next paragraph) but because this is probably the very first time that we see a JVM language with true support for reified generics. This innovation needs to be saluted. Correction from the comments: Gosu has reified generics Having said that, I don’t feel extremely excited by this feature because overall, I think that reified generics come at too high a price. I’ll try to dedicate a full blog post to this topic alone, because it deserves a more thorough treatment. 4) Commercial support JetBrains has a very clear financial interest in seeing Kotlin succeed. It’s not just that they are a commercial entity that can put money behind the development of the language, it’s also that the success of the language would most likely mean that they will sell more IDEA licenses, and this can also turn into an additional revenue stream derived from whatever other tools they might come up with that would be part of the Kotlin ecosystem. This kind of commercial support for a language was completely unheard of in the JVM world for fifteen years, and suddenly, we have two instances of it (Typesafe and now JetBrains). This is a good sign for the JVM community. 5) Still no Java successors Finally, the simple truth is that we still haven’t found any credible Java successor. Java still reigns supreme and is showing no sign of giving away any mindshare. Pulling numbers out of thin air, I would say that out of all the code currently running on the JVM today, maybe 94% of it is in Java, 3% is in Groovy and 1% is in Scala. This 94% figure needs to go down, but so far, no language has stepped up to whittle it down significantly. What will it take? Obviously, nothing that the current candidates are offering (closures, modularity, functional features, more concise syntax, etc…) has been enough to move that needle. Something is still missing. Could the missing piece be “stellar IDE support” or “reified generics”? We don’t know yet because no contender offers any of these features, but Kotlin will, so we will soon know. Either way, I am predicting that we will keep seeing new JVM languages pop up at a regular pace until one finally claims the prize. And this should be cause for rejoicing for everyone interested in the JVM ecosystem. So let’s cheer for Kotlin and wish JetBrains the best of luck with their endeavor. I can’t wait to see what will come out of this. Oh, and secretly, I am rooting for Eclipse to start working on their own JVM language too, obviously. From http://beust.com/weblog/2011/07/20/five-reasons-why-should-rejoice-about-kotlin/
July 22, 2011
by Cedric Beust
· 8,704 Views
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Java Collection Performance
Learn more about Java collection performance in this post.
July 18, 2011
by Leo Lewis
· 124,512 Views · 10 Likes
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Lucene's near-real-time search is fast!
Lucene's near-real-time (NRT) search feature, available since 2.9, enables an application to make index changes visible to a new searcher with fast turnaround time. In some cases, such as modern social/news sites (e.g., LinkedIn, Twitter, Facebook, Stack Overflow, Hacker News, DZone, etc.), fast turnaround time is a hard requirement. Fortunately, it's trivial to use. Just open your initial NRT reader, like this: // w is your IndexWriter IndexReader r = IndexReader.open(w, true); (That's the 3.1+ API; prior to that use w.getReader() instead). The returned reader behaves just like one opened with IndexReader.open: it exposes the point-in-time snapshot of the index as of when it was opened. Wrap it in an IndexSearcher and search away! Once you've made changes to the index, call r.reopen() and you'll get another NRT reader; just be sure to close the old one. What's special about the NRT reader is that it searches uncommitted changes from IndexWriter, enabling your application to decouple fast turnaround time from index durability on crash (i.e., how often commit is called), something not previously possible. Under the hood, when an NRT reader is opened, Lucene flushes indexed documents as a new segment, applies any buffered deletions to in-memory bit-sets, and then opens a new reader showing the changes. The reopen time is in proportion to how many changes you made since last reopening that reader. Lucene's approach is a nice compromise between immediate consistency, where changes are visible after each index change, and eventual consistency, where changes are visible "later" but you don't usually know exactly when. With NRT, your application has controlled consistency: you decide exactly when changes must become visible. Recently there have been some good improvements related to NRT: New default merge policy, TieredMergePolicy, which is able to select more efficient non-contiguous merges, and favors segments with more deletions. NRTCachingDirectory takes load off the IO system by caching small segments in RAM (LUCENE-3092). When you open an NRT reader you can now optionally specify that deletions do not need to be applied, making reopen faster for those cases that can tolerate temporarily seeing deleted documents returned, or have some other means of filtering them out (LUCENE-2900). Segments that are 100% deleted are now dropped instead of inefficiently merged (LUCENE-2010). How fast is NRT search? I created a simple performance test to answer this. I first built a starting index by indexing all of Wikipedia's content (25 GB plain text), broken into 1 KB sized documents. Using this index, the test then reindexes all the documents again, this time at a fixed rate of 1 MB/second plain text. This is a very fast rate compared to the typical NRT application; for example, it's almost twice as fast as Twitter's recent peak during this year's superbowl (4,064 tweets/second), assuming every tweet is 140 bytes, and assuming Twitter indexed all tweets on a single shard. The test uses updateDocument, replacing documents by randomly selected ID, so that Lucene is forced to apply deletes across all segments. In addition, 8 search threads run a fixed TermQuery at the same time. Finally, the NRT reader is reopened once per second. I ran the test on modern hardware, a 24 core machine (dual x5680 Xeon CPUs) with an OCZ Vertex 3 240 GB SSD, using Oracle's 64 bit Java 1.6.0_21 and Linux Fedora 13. I gave Java a 2 GB max heap, and used MMapDirectory. The test ran for 6 hours 25 minutes, since that's how long it takes to re-index all of Wikipedia at a limited rate of 1 MB/sec; here's the resulting QPS and NRT reopen delay (milliseconds) over that time: The search QPS is green and the time to reopen each reader (NRT reopen delay in milliseconds) is blue; the graph is an interactive Dygraph, so if you click through above, you can then zoom in to any interesting region by clicking and dragging. You can also apply smoothing by entering the size of the window into the text box in the bottom left part of the graph. Search QPS dropped substantially with time. While annoying, this is expected, because of how deletions work in Lucene: documents are merely marked as deleted and thus are still visited but then filtered out, during searching. They are only truly deleted when the segments are merged. TermQuery is a worst-case query; harder queries, such as BooleanQuery, should see less slowdown from deleted, but not reclaimed, documents. Since the starting index had no deletions, and then picked up deletions over time, the QPS dropped. It looks like TieredMergePolicy should perhaps be even more aggressive in targeting segments with deletions; however, finally around 5:40 a very large merge (reclaiming many deletions) was kicked off. Once it finished the QPS recovered somewhat. Note that a real NRT application with deletions would see a more stable QPS since the index in "steady state" would always have some number of deletions in it; starting from a fresh index with no deletions is not typical. Reopen delay during merging The reopen delay is mostly around 55-60 milliseconds (mean is 57.0), which is very fast (i.e., only 5.7% "duty cycle" of the every 1.0 second reopen rate). There are random single spikes, which is caused by Java running a full GC cycle. However, large merges can slow down the reopen delay (once around 1:14, again at 3:34, and then the very large merge starting at 5:40). Many small merges (up to a few 100s of MB) were done but don't seem to impact reopen delay. Large merges have been a challenge in Lucene for some time, also causing trouble for ongoing searching. I'm not yet sure why large merges so adversely impact reopen time; there are several possibilities. It could be simple IO contention: a merge keeps the IO system very busy reading and writing many bytes, thus interfering with any IO required during reopen. However, if that were the case, NRTCachingDirectory (used by the test) should have prevented it, but didn't. It's also possible that the OS is [poorly] choosing to evict important process pages, such as the terms index, in favor of IO caching, causing the term lookups required when applying deletes to hit page faults; however, this also shouldn't be happening in my test since I've set Linux's swappiness to 0. Yet another possibility is Linux's write cache becomes temporarily too full, thus stalling all IO in the process until it clears; in this case perhaps tuning some of Linux's pdflush tunables could help, although I'd much rather find a Lucene-only solution so this problem can be fixed without users having to tweak such advanced OS tunables, even swappiness. Fortunately, we have an active Google Summer of Code student, Varun Thacker, working on enabling Directory implementations to pass appropriate flags to the OS when opening files for merging (LUCENE-2793 and LUCENE-2795). From past testing I know that passing O_DIRECT can prevent merges from evicting hot pages, so it's possible this will fix our slow reopen time as well since it bypasses the write cache. Finally, it's always possible other OSs do a better job managing the buffer cache, and wouldn't see such reopen delays during large merges. This issue is still a mystery, as there are many possibilities, but we'll eventually get to the bottom of it. It could be we should simply add our own IO throttling, so we can control net MB/sec read and written by merging activity. This would make a nice addition to Lucene! Except for the slowdown during merging, the performance of NRT is impressive. Most applications will have a required indexing rate far below 1 MB/sec per shard, and for most applications reopening once per second is fast enough. While there are exciting ideas to bring true real-time search to Lucene, by directly searching IndexWriter's RAM buffer as Michael Busch has implemented at Twitter with some cool custom extensions to Lucene, I doubt even the most demanding social apps actually truly need better performance than we see today with NRT. NIOFSDirectory vs MMapDirectory Out of curiosity, I ran the exact same test as above, but this time with NIOFSDirectory instead of MMapDirectory: There are some interesting differences. The search QPS is substantially slower -- starting at 107 QPS vs 151, though part of this could easily be from getting different compilation out of hotspot. For some reason TermQuery, in particular, has high variance from one JVM instance to another. The mean reopen time is slower: 67.7 milliseconds vs 57.0, and the reopen time seems more affected by the number of segments in the index (this is the saw-tooth pattern in the graph, matching when minor merges occur). The takeaway message seems clear: on Linux, use MMapDirectory not NIOFSDirectory! Optimizing your NRT turnaround time My test was just one datapoint, at a fixed fast reopen period (once per second) and at a high indexing rate (1 MB/sec plain text). You should test specifically for your use-case what reopen rate works best. Generally, the more frequently you reopen the faster the turnaround time will be, since fewer changes need to be applied; however, frequent reopening will reduce the maximum indexing rate. Most apps have relatively low required indexing rates compared to what Lucene can handle and can thus pick a reopen rate to suit the application's turnaround time requirements. There are also some simple steps you can take to reduce the turnaround time: Store the index on a fast IO system, ideally a modern SSD. Install a merged segment warmer (see IndexWriter.setMergedSegmentWarmer). This warmer is invoked by IndexWriter to warm up a newly merged segment without blocking the reopen of a new NRT reader. If your application uses Lucene's FieldCache or has its own caches, this is important as otherwise that warming cost will be spent on the first query to hit the new reader. Use only as many indexing threads as needed to achieve your required indexing rate; often 1 thread suffices. The fewer threads used for indexing, the faster the flushing, and the less merging (on trunk). If you are using Lucene's trunk, and your changes include deleting or updating prior documents, then use the Pulsing codec for your id field since this gives faster lookup performance which will make your reopen faster. Use the new NRTCachingDirectory, which buffers small segments in RAM to take load off the IO system (LUCENE-3092). Pass false for applyDeletes when opening an NRT reader, if your application can tolerate seeing deleted doccs from the returned reader. While it's not clear that thread priorities actually work correctly (see this Google Tech Talk), you should still set your thread priorities properly: the thread reopening your readers should be highest; next should be your indexing threads; and finally lowest should be all searching threads. If the machine becomes saturated, ideally only the search threads should take the hit. Happy near-real-time searching!
July 11, 2011
by Michael Mccandless
· 19,294 Views
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SEVERE: Error in xpath:java.lang.RuntimeException: solrconfig.xml missing luceneMatchVersion
One of the things that changed from Solr 1.4.1 to 1.5+ was the introduction of a parameter to tell Solr / Lucene which kind of compability version its index files should be created and used in. Solr now refuses to start if you do not provide this setting (if you’re upgrading a previous installation from 1.4.1 or earlier). The fix isn’t really straight forward, and you’ll probably have to recreate your index files if you’re just arriving at the scene with Solr / Lucene 3.2 and 4.0. Solr 3.0 (1.5) might be able to upgrade the files from the 2.9 version, but if you’re jumping from Lucene 2.9 to 4.0, the easiest solution seems to be to delete the current index and reindex (set up replication, disable replication from the master, query the slave while reindexing the master, etc.. and you’ll have no downtime while doing this!). You’ll need to add a parameter to your solrconfig.xml file as well in the section. LUCENE_CURRENT Other valid values are LUCENE_30, LUCENE_31, LUCENE_32 and LUCENE_40. These values represent specific versions of the index structure, while LUCENE_CURRENT will use the version depending on which particular release of Lucene you’re using. The version format will be upgraded automagically between most releases, so you’ll probably be fine by using LUCENE_CURRENT. If you however are trying to load index files that are more than one version older, you may have to use one of the other values.
July 9, 2011
by Mats Lindh
· 10,419 Views
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Programmatically Restart a Java Application
Today I'll talk about a famous problem : restarting a Java application. It is especially useful when changing the language of a GUI application, so that we need to restart it to reload the internationalized messages in the new language. Some look and feel also require to relaunch the application to be properly applied. A quick Google search give plenty answers using a simple : Runtime.getRuntime().exec("java -jar myApp.jar"); System.exit(0); This indeed basically works, but this answer that does not convince me for several reasons : 1) What about VM and program arguments ? (this one is secondary in fact, because can be solve it quite easily). 2) What if the main is not a jar (which is usually the case when launching from an IDE) ? 3) Most of all, what about the cleaning of the closing application ? For example if the application save some properties when closing, commit some stuffs etc. 4) We need to change the command line in the code source every time we change a parameter, the name of the jar, etc. Overall, something that works fine for some test, sandbox use, but not a generic and elegant way in my humble opinion. Ok, so my purpose here is to implement a method : public static void restartApplication(Runnable runBeforeRestart) throws IOException { ... } that could be wrapped in some jar library, and could be called, without any code modification, by any Java program, and by solving the 4 points raised previously. Let's start by looking at each point and find a way to answer them in an elegant way (let's say the most elegant way that I found). 1) How to get the program and VM arguments ? Pretty simple, by calling a : ManagementFactory.getRuntimeMXBean().getInputArguments(); Concerning the program arguments, the Java property sun.java.command we'll give us both the main class (or jar) and the program arguments, and both will be useful. String[] mainCommand = System.getProperty("sun.java.command").split(" "); 2) First retrieve the java bin executable given by the java.home property : String java = System.getProperty("java.home") + "/bin/java"; The simple case is when the application is launched from a jar. The jar name is given by a mainCommand[0], and it is in the current path, so we just have to append the application parameters mainCommand[1..n] with a -jar to get the command to execute : String cmd = java + vmArgsOneLine + "-jar " + new File(mainCommand[0]).getPath() + mainCommand[1..n]; We'll suppose here that the Manifest of the jar is well done, and we don't need to specify the main nor the classpath. Second case : when the application is launched from a class. In this case, we'll specify the class path and the main class : String cmd = java + vmArgsOneLine + -cp \"" + System.getProperty("java.class.path") + "\" " + mainCommand[0] + mainCommand[1..n]; 3) Third point, cleaning the old application before launching the new one. To do such a trick, we'll just execute the Runtime.getRuntime().exec(cmd) in a shutdown hook. This way, we'll be sure that everything will be properly clean up before creating the new application instance. Runtime.getRuntime().addShutdownHook(new Thread() { @Override public void run() { ... } }); Run the runBeforeRestart that contains some custom code that we want to be executed before restarting the application : if(runBeforeRestart != null) { runBeforeRestart.run(); } And finally, call the System.exit(0);. And we're done. Here is our generic method : /** * Sun property pointing the main class and its arguments. * Might not be defined on non Hotspot VM implementations. */ public static final String SUN_JAVA_COMMAND = "sun.java.command"; /** * Restart the current Java application * @param runBeforeRestart some custom code to be run before restarting * @throws IOException */ public static void restartApplication(Runnable runBeforeRestart) throws IOException { try { // java binary String java = System.getProperty("java.home") + "/bin/java"; // vm arguments List vmArguments = ManagementFactory.getRuntimeMXBean().getInputArguments(); StringBuffer vmArgsOneLine = new StringBuffer(); for (String arg : vmArguments) { // if it's the agent argument : we ignore it otherwise the // address of the old application and the new one will be in conflict if (!arg.contains("-agentlib")) { vmArgsOneLine.append(arg); vmArgsOneLine.append(" "); } } // init the command to execute, add the vm args final StringBuffer cmd = new StringBuffer("\"" + java + "\" " + vmArgsOneLine); // program main and program arguments String[] mainCommand = System.getProperty(SUN_JAVA_COMMAND).split(" "); // program main is a jar if (mainCommand[0].endsWith(".jar")) { // if it's a jar, add -jar mainJar cmd.append("-jar " + new File(mainCommand[0]).getPath()); } else { // else it's a .class, add the classpath and mainClass cmd.append("-cp \"" + System.getProperty("java.class.path") + "\" " + mainCommand[0]); } // finally add program arguments for (int i = 1; i < mainCommand.length; i++) { cmd.append(" "); cmd.append(mainCommand[i]); } // execute the command in a shutdown hook, to be sure that all the // resources have been disposed before restarting the application Runtime.getRuntime().addShutdownHook(new Thread() { @Override public void run() { try { Runtime.getRuntime().exec(cmd.toString()); } catch (IOException e) { e.printStackTrace(); } } }); // execute some custom code before restarting if (runBeforeRestart!= null) { runBeforeRestart.run(); } // exit System.exit(0); } catch (Exception e) { // something went wrong throw new IOException("Error while trying to restart the application", e); } } From : http://lewisleo.blogspot.jp/2012/08/programmatically-restart-java.html
July 6, 2011
by Leo Lewis
· 136,394 Views · 3 Likes
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How to Tame Java GC Pauses? Surviving 16GiB Heap and Greater
Learn how to survive 16GiB and greater heaps, and control Java GC pauses.
June 28, 2011
by Alexey Ragozin
· 162,718 Views
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XML unmarshalling benchmark in Java: JAXB vs STax vs Woodstox
towards the end of last week i started thinking how to deal with large amounts of xml data in a resource-friendly way.the main problem that i wanted to solve was how to process large xml files in chunks while at the same time providing upstream/downstream systems with some data to process. of course i've been using jaxb technology for few years now; the main advantage of using jaxb is the quick time-to-market; if one possesses an xml schema, there are tools out there to auto-generate the corresponding java domain model classes automatically (eclipse indigo, maven jaxb plugins in various sauces, ant tasks, to name a few). the jaxb api then offers a marshaller and an unmarshaller to write/read xml data, mapping the java domain model. when thinking of jaxb as solution for my problem i suddendlly realised that jaxb keeps the whole objectification of the xml schema in memory, so the obvious question was: "how would our infrastructure cope with large xml files (e.g. in my case with a number of elements > 100,000) if we were to use jaxb?". i could have simply produced a large xml file, then a client for it and find out about memory consumption. as one probably knows there are mainly two approaches to processing xml data in java: dom and sax. with dom, the xml document is represented into memory as a tree; dom is useful if one needs cherry-pick access to the tree nodes or if one needs to write brief xml documents. on the other side of the spectrum there is sax, an event-driven technology, where the whole document is parsed one xml element at the time, and for each xml significative event, callbacks are "pushed" to a java client which then deals with them (such as start_document, start_element, end_element, etc). since sax does not bring the whole document into memory but it applies a cursor like approach to xml processing it does not consume huge amounts of memory. the drawback with sax is that it processes the whole document start to finish; this might not be necessarily what one wants for large xml documents. in my scenario, for instance, i'd like to be able to pass to downstream systems xml elements as they are available, but at the same time maybe i'd like to pass only 100 elements at the time, implementing some sort of pagination solution. dom seems too demanding from a memory-consumption point of view, whereas sax seems to coarse-grained for my needs. i remembered reading something about stax, a java technology which offered a middle ground between the capability to pull xml elements (as opposed to pushing xml elements, e.g. sax) while being ram-friendly. i then looked into the technology and decided that stax was probably the compromise i was looking for; however i wanted to keep the easy programming model offered by jaxb, so i really needed a combination of the two. while investigating stax, i came across woodstox; this open source project promises to be a faster xml parser than many othrers, so i decided to include it in my benchmark as well. i now had all elements to create a benchmark to give me memory consumption and processing speed metrics when processing large xml documents. the benchmark plan in order to create a benchmark i needed to do the following: create an xml schema which defined my domain model. this would be the input for jaxb to create the java domain model create three large xml files representing the model, with 10,000 / 100,000 / 1,000,000 elements respectively have a pure jaxb client which would unmarshall the large xml files completely in memory have a stax/jaxb client which would combine the low-memory consumption of sax technologies with the ease of programming model offered by jaxb have a woodstox/jaxb client with the same characteristics of the stax/jaxb client (in few words i just wanted to change the underlying parser and see if i could obtain any performance boost) record both memory consumption and speed of processing (e.g. how quickly would each solution make xml chunks available in memory as jaxb domain model classes) make the results available graphically, since, as we know, one picture tells one thousands words. the domain model xml schema i decided for a relatively easy domain model, with xml elements representing people, with their names and addresses. i also wanted to record whether a person was active. using jaxb to create the java model i am a fan of maven and use it as my default tool to build systems. this is the pom i defined for this little benchmark: 4.0.0 uk.co.jemos.tests.xml large-xml-parser 1.0.0-snapshot jar large-xml-parser http://www.jemos.co.uk utf-8 org.apache.maven.plugins maven-compiler-plugin 2.3.2 1.6 1.6 org.jvnet.jaxb2.maven2 maven-jaxb2-plugin 0.7.5 generate ${basedir}/src/main/resources **/*.xsd true -enableintrospection -xtostring -xequals -xhashcode true true org.jvnet.jaxb2_commons jaxb2-basics 0.6.1 org.apache.maven.plugins maven-jar-plugin 2.3.1 true uk.co.jemos.tests.xml.xmlpullbenchmarker org.apache.maven.plugins maven-assembly-plugin 2.2 ${project.build.directory}/site/downloads src/main/assembly/project.xml src/main/assembly/bin.xml junit junit 4.5 test uk.co.jemos.podam podam 2.3.11.release commons-io commons-io 2.0.1 com.sun.xml.bind jaxb-impl 2.1.3 org.jvnet.jaxb2_commons jaxb2-basics-runtime 0.6.0 org.codehaus.woodstox stax2-api 3.0.3 just few things to notice about this pom.xml. i use java 6, since starting from version 6, java contains all the xml libraries for jaxb, dom, sax and stax. to auto-generate the domain model classes from the xsd schema, i used the excellent maven-jaxb2-plugin, which allows, amongst other things, to obtain pojos with tostring, equals and hashcode support. i have also declared the jar plugin, to create an executable jar for the benchmark and the assembly plugin to distribute an executable version of the benchmark. the code for the benchmark is attached to this post, so if you want to build it and run it yourself, just unzip the project file, open a command line and run: $ mvn clean install assembly:assembly this command will place *-bin.* files into the folder target/site/downloads. unzip the one of your preference and to run the benchmark use (-dcreate.xml=true will generate the xml files. don't pass it if you have these files already, e.g. after the first run): $ java -jar -dcreate.xml=true large-xml-parser-1.0.0-snapshot.jar creating the test data to create the test data, i used podam , a java tool to auto-fill pojos and javabeans with data. the code is as simple as: jaxbcontext context = jaxbcontext .newinstance("xml.integration.jemos.co.uk.large_file"); marshaller marshaller = context.createmarshaller(); marshaller.setproperty(marshaller.jaxb_formatted_output, boolean.true); marshaller.setproperty(marshaller.jaxb_encoding, "utf-8"); personstype personstype = new objectfactory().createpersonstype(); list persons = personstype.getperson(); podamfactory factory = new podamfactoryimpl(); for (int i = 0; i < nbrelements; i++) { persons.add(factory.manufacturepojo(persontype.class)); } jaxbelement towrite = new objectfactory() .createpersons(personstype); file file = new file(filename); bufferedoutputstream bos = new bufferedoutputstream( new fileoutputstream(file), 4096); try { marshaller.marshal(towrite, bos); bos.flush(); } finally { ioutils.closequietly(bos); } the xmlpullbenchmarker generates three large xml files under ~/xml-benchmark: large-person-10000.xml (approx 3m) large-person-100000.xml (approx 30m) large-person-1000000.xml (approx 300m) each file looks like the following: ult6yn0d7l u8djoutlk2 dxwlpow6x3 o4ggvximo7 io7kuz0xmz lmiy1uqkxs zhtukbtwti gbc7kex9tn kxmwnlprep 9bibs1m5gr hmtqpxjcpw bhpf1rrldm ydjjillyrw xgstdjcfjc [..etc] each file contains 10,000 / 100,000 / 1,000,000 elements. the running environments i tried the benchmarker on three different environments: ubuntu 10, 64-bit running as virtual machine on a windows 7 ultimate, with cpu i5, 750 @2.67ghz and 2.66ghz, 8gb ram of which 4gb dedicated to the vm. jvm: 1.6.0_25, hotspot windows 7 ultimate , hosting the above vm, therefore with same processor. jvm, 1.6.0_24, hotspot ubuntu 10, 32-bit , 3gb ram, dual core. jvm, 1.6.0_24, openjdk the xml unmarshalling to unmarshall the code i used three different strategies: pure jaxb stax + jaxb woodstox + jaxb pure jaxb unmarshalling the code which i used to unmarshall the large xml files using jaxb follows: private void readlargefilewithjaxb(file file, int nbrrecords) throws exception { jaxbcontext ucontext = jaxbcontext .newinstance("xml.integration.jemos.co.uk.large_file"); unmarshaller unmarshaller = ucontext.createunmarshaller(); bufferedinputstream bis = new bufferedinputstream(new fileinputstream( file)); long start = system.currenttimemillis(); long memstart = runtime.getruntime().freememory(); long memend = 0l; try { jaxbelement root = (jaxbelement) unmarshaller .unmarshal(bis); root.getvalue().getperson().size(); memend = runtime.getruntime().freememory(); long end = system.currenttimemillis(); log.info("jaxb (" + nbrrecords + "): - total memory used: " + (memstart - memend)); log.info("jaxb (" + nbrrecords + "): time taken in ms: " + (end - start)); } finally { ioutils.closequietly(bis); } } the code uses a one-liner to unmarshall each xml file: jaxbelement root = (jaxbelement) unmarshaller .unmarshal(bis); i also accessed the size of the underlying persontype collection to "touch" in memory data. btw, debugging the application showed that all 10,000 elements were indeed available in memory after this line of code. jaxb + stax with stax, i just had to use an xmlstreamreader, iterate through all elements, and pass each in turn to jaxb to unmarshall it into a persontype domain model object. the code follows: // set up a stax reader xmlinputfactory xmlif = xmlinputfactory.newinstance(); xmlstreamreader xmlr = xmlif .createxmlstreamreader(new filereader(file)); jaxbcontext ucontext = jaxbcontext.newinstance(persontype.class); unmarshaller unmarshaller = ucontext.createunmarshaller(); long start = system.currenttimemillis(); long memstart = runtime.getruntime().freememory(); long memend = 0l; try { xmlr.nexttag(); xmlr.require(xmlstreamconstants.start_element, null, "persons"); xmlr.nexttag(); while (xmlr.geteventtype() == xmlstreamconstants.start_element) { jaxbelement pt = unmarshaller.unmarshal(xmlr, persontype.class); if (xmlr.geteventtype() == xmlstreamconstants.characters) { xmlr.next(); } } memend = runtime.getruntime().freememory(); long end = system.currenttimemillis(); log.info("stax - (" + nbrrecords + "): - total memory used: " + (memstart - memend)); log.info("stax - (" + nbrrecords + "): time taken in ms: " + (end - start)); } finally { xmlr.close(); } } note that this time when creating the context, i had to specify that it was for the persontype object, and when invoking the jaxb unmarshalling i had to pass also the desired returned class type, with: jaxbelement pt = unmarshaller.unmarshal(xmlr, persontype.class); note that i don't to anything with the object, just create it, to keep the benchmark as truthful and possible by not introducing any unnecessary steps. jaxb + woodstox with woodstox, the approach is very similar to the one used with stax. in fact woodstox provides a stax2 compatible api, so all i had to do was to provide the correct factory and...bang! i had woodstox under the cover working. private void readlargexmlwithfasterstax(file file, int nbrrecords) throws factoryconfigurationerror, xmlstreamexception, filenotfoundexception, jaxbexception { // set up a woodstox reader xmlinputfactory xmlif = xmlinputfactory2.newinstance(); xmlstreamreader xmlr = xmlif .createxmlstreamreader(new filereader(file)); jaxbcontext ucontext = jaxbcontext.newinstance(persontype.class); unmarshaller unmarshaller = ucontext.createunmarshaller(); long start = system.currenttimemillis(); long memstart = runtime.getruntime().freememory(); long memend = 0l; try { xmlr.nexttag(); xmlr.require(xmlstreamconstants.start_element, null, "persons"); xmlr.nexttag(); while (xmlr.geteventtype() == xmlstreamconstants.start_element) { jaxbelement pt = unmarshaller.unmarshal(xmlr, persontype.class); if (xmlr.geteventtype() == xmlstreamconstants.characters) { xmlr.next(); } } memend = runtime.getruntime().freememory(); long end = system.currenttimemillis(); log.info("woodstox - (" + nbrrecords + "): total memory used: " + (memstart - memend)); log.info("woodstox - (" + nbrrecords + "): time taken in ms: " + (end - start)); } finally { xmlr.close(); } } note the following line: xmlinputfactory xmlif = xmlinputfactory2.newinstance(); where i pass in a stax2 xmlinputfactory. this uses the woodstox implementation. the main loop once the files are in place (you obtain this by passing -dcreate.xml=true), the main performs the following: system.gc(); system.gc(); for (int i = 0; i < 10; i++) { main.readlargefilewithjaxb(new file(output_folder + file.separatorchar + "large-person-10000.xml"), 10000); main.readlargefilewithjaxb(new file(output_folder + file.separatorchar + "large-person-100000.xml"), 100000); main.readlargefilewithjaxb(new file(output_folder + file.separatorchar + "large-person-1000000.xml"), 1000000); main.readlargexmlwithstax(new file(output_folder + file.separatorchar + "large-person-10000.xml"), 10000); main.readlargexmlwithstax(new file(output_folder + file.separatorchar + "large-person-100000.xml"), 100000); main.readlargexmlwithstax(new file(output_folder + file.separatorchar + "large-person-1000000.xml"), 1000000); main.readlargexmlwithfasterstax(new file(output_folder + file.separatorchar + "large-person-10000.xml"), 10000); main.readlargexmlwithfasterstax(new file(output_folder + file.separatorchar + "large-person-100000.xml"), 100000); main.readlargexmlwithfasterstax(new file(output_folder + file.separatorchar + "large-person-1000000.xml"), 1000000); } it invites the gc to run, although as we know this is at the gc thread discretion. it then executes each strategy 10 times, to normalise ram and cpu consumption. the final data are then collected by running an average on the ten runs. the benchmark results for memory consumption here follow some diagrams which show memory consumption across the different running environments, when unmarshalling 10,000 / 100,000 / 1,000,000 files. you will probably notice that memory consumption for stax-related strategies often shows a negative value. this means that there was more free memory after unmarshalling all elements than there was at the beginning of the unmarshalling loop; this, in turn, suggests that the gc ran a lot more with stax than with jaxb. this is logical if one thinks about it; since with stax we don't keep all objects into memory there are more objects available for garbage collection. in this particular case i believe the persontype object created in the while loop gets eligible for gc and enters the young generation area and then it gets reclamed by the gc. this, however, should have a minimum impact on performance, since we know that claiming objects from the young generation space is done very efficiently. summary for 10,000 xml elements summary for 100,000 xml elements summary for 1,000,000 xml elements the benchmark results for processing speed results for 10,000 elements results for 100,000 elements results for 1,000,000 elements conclusions the results on all three different environments, although with some differences, all tell us the same story: if you are looking for performance (e.g. xml unmarshalling speed), choose jaxb if you are looking for low-memory usage (and are ready to sacrifice some performance speed), then use stax. my personal opinion is also that i wouldn't go for woodstox, but i'd choose either jaxb (if i needed processing power and could afford the ram) or stax (if i didn't need top speed and was low on infrastructure resources). both these technologies are java standards and part of the jdk starting from java 6. resources benchmarker source code zip version: download large-xml-parser-1.0.0-snapshot-project tar.gz version: download large-xml-parser-1.0.0-snapshot-project.tar tar.bz2 version: download large-xml-parser-1.0.0-snapshot-project.tar benchmarker executables: zip version: download large-xml-parser-1.0.0-snapshot-bin tar.gz version: download large-xml-parser-1.0.0-snapshot-bin.tar tar.bz2 version: download large-xml-parser-1.0.0-snapshot-bin.tar data files: ubuntu 64-bit vm running environment: download stax-vs-jaxb-ubuntu-64-vm ubuntu 32-bit running environment : download stax-vs-jaxb-ubuntu-32-bit windows 7 ultimate running environment : download stax-vs-jaxb-windows7 from http://tedone.typepad.com/blog/2011/06/unmarshalling-benchmark-in-java-jaxb-vs-stax-vs-woodstox.html
June 27, 2011
by Marco Tedone
· 71,885 Views · 9 Likes
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Java EE6 CDI, Named Components and Qualifiers
One of the biggest promises java EE6 made, was to ease the use of dependency injection. They did, using CDI. CDI, which stands for Contexts and Dependency Injection for Java EE, offers a base set to apply dependency injection in your enterprise application. Before CDI, EJB 3 also introduced dependency injection, but this was a bit basic. You could inject an EJB (statefull or stateless) into another EJB or Servlet (if you container supported this). Offcourse not every application needs EJB’s, that is why CDI is gaining so much popularity. To start, I have made this example. There is a Payment interface, and 2 implementations. A cash payment and a visa payment. I want to be able to choose witch type of payment I inject, still using the same interface. public interface Payment { void pay(BigDecimal amount); } and the 2 implementations public class CashPaymentImpl implements Payment { private static final Logger LOGGER = Logger.getLogger(CashPaymentImpl.class.toString()); @Override public void pay(BigDecimal amount) { LOGGER.log(Level.INFO, "payed {0} cash", amount.toString()); } } public class VisaPaymentImpl implements Payment { private static final Logger LOGGER = Logger.getLogger(VisaPaymentImpl.class.toString()); @Override public void pay(BigDecimal amount) { LOGGER.log(Level.INFO, "payed {0} with visa", amount.toString()); } } To inject the interface we use the @Inject annotation. The annotation does basically what it says. It injects a component, that is available in your application. 1 @Inject private Payment payment; Off course, you saw this coming from a mile away, this won’t work. The container has 2 implementations of our Payment interface, so he does not know which one to inject. Unsatisfied dependencies for type [Payment] with qualifiers [@Default] at injection point [[field] @Inject private be.styledideas.blog.qualifier.web.PaymentBackingAction.payment] So we need some sort of qualifier to point out what implementation we want. CDI offers the @Named Annotation, allowing you to give a name to an implementation. @Named("cash") public class CashPaymentImpl implements Payment { private static final Logger LOGGER = Logger.getLogger(CashPaymentImpl.class.toString()); @Override public void pay(BigDecimal amount) { LOGGER.log(Level.INFO, "payed {0} cash", amount.toString()); } } @Named("visa") public class VisaPaymentImpl implements Payment { private static final Logger LOGGER = Logger.getLogger(VisaPaymentImpl.class.toString()); @Override public void pay(BigDecimal amount) { LOGGER.log(Level.INFO, "payed {0} with visa", amount.toString()); } } When we now change our injection code, we can specify wich implementation we need. @Inject private @Named("visa") Payment payment; This works, but the flexibility is limited. When we want to rename our @Named parameter, we have to change it on everyplace where it is used. There is also no refactoring support. There is a beter alternative using Custom made annotations using the @Qualifier annotation. Let us change the code a little bit. First of all, we create new Annotation types. @java.lang.annotation.Documented @java.lang.annotation.Retention(RetentionPolicy.RUNTIME) @javax.inject.Qualifier public @interface CashPayment {} @java.lang.annotation.Documented @java.lang.annotation.Retention(RetentionPolicy.RUNTIME) @javax.inject.Qualifier public @interface VisaPayment {} The @Qualifier annotation that is added to the annotation, makes this annotation discoverable by the container. We can now simply add these annotations to our implementations. @CashPayment public class CashPaymentImpl implements Payment { private static final Logger LOGGER = Logger.getLogger(CashPaymentImpl.class.toString()); @Override public void pay(BigDecimal amount) { LOGGER.log(Level.INFO, "payed {0} cash", amount.toString()); } } @VisaPayment public class VisaPaymentImpl implements Payment { private static final Logger LOGGER = Logger.getLogger(VisaPaymentImpl.class.toString()); @Override public void pay(BigDecimal amount) { LOGGER.log(Level.INFO, "payed {0} with visa", amount.toString()); } } The only thing we now need to do, is change our injection code to @Inject private @VisaPayment Payment payment; When we now change something to our qualifier, we have nice compiler and refactoring support. This also adds extra flexibilty for API or Domain-specific language design. From http://styledideas.be/blog/2011/06/16/java-ee6-cdi-named-components-and-qualifiers/
June 24, 2011
by Jelle Victoor
· 73,193 Views · 5 Likes
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Java Web Application Security - Part V: Penetrating with Zed Attack Proxy
web application security is an important part of developing applications. as developers, i think we often forget this, or simply ignore it. in my career, i've learned a lot about web application security. however, i only recently learned and became familiar with the rapidly growing "appsec" industry. i found a disconnect between what appsec consultants were selling and what i was developing. it seemed like appsec consultants were selling me fear, mostly because i thought my apps were secure. so i set out on a mission to learn more about web application security and penetration testing to see if my apps really were secure. this article is part of that mission, as are the previous articles i've written in this series. java web application security - part i: java ee 6 login demo java web application security - part ii: spring security login demo java web application security - part iii: apache shiro login demo java web application security - part iv: programmatic login apis when i first decided i wanted to do a talk on webapp security, i knew it would be more interesting if i showed the audience how to hack and fix an application. that's why i wrote it into my original proposal : webapp security: develop. penetrate. protect. relax. in this session, you'll learn how to implement authentication in your java web applications using spring security, apache shiro and good ol' java ee container managed authentication. you'll also learn how to secure your rest api with oauth and lock it down with ssl. after learning how to develop authentication, i'll introduce you to owasp, the owasp top 10, its testing guide and its code review guide. from there, i'll discuss using webgoat to verify your app is secure and commercial tools like webapp firewalls and accelerators. at the time, i hadn't done much webapp pentesting . you can tell this from the fact that i mentioned webgoat as the pentesting tool. from webgoat's project page : webgoat is a deliberately insecure j2ee web application maintained by owasp designed to teach web application security lessons. in each lesson, users must demonstrate their understanding of a security issue by exploiting a real vulnerability in the webgoat application. for example, in one of the lessons the user must use sql injection to steal fake credit card numbers. the application is a realistic teaching environment, providing users with hints and code to further explain the lesson. what i really meant to say and use was zed attack proxy , also known as owasp zap. zap is a java desktop application that you setup as a proxy for your browser, then use to find vulnerabilities in your application. this article explains how you can use zap to pentest a web applications and fix its vulnerabilities. the application i'll be using in this article is the ajax login application i've been using throughout this series. i think it's great that projects like damn vulnerable web app and webgoat exist, but i wanted to test one that i think is secure, rather than one i know is not secure. in this particular example, i'll be testing the spring security implementation, since that's the framework i most often use in my open source projects. zed attack proxy tutorial download and run the application install and configure zap perform a scan fix vulnerabilities summary download and run the application to begin, download the application and expand it on your hard drive. this app is the completed version of the ajax login application referenced in java web application security - part ii: spring security login demo . you'll need java 6 and maven installed to run the app. run it using mvn jetty:run and open http://localhost:8080 in your browser. you'll see it's a simple crud application for users and you need to login to do anything. install and configure zap the zed attack proxy (zap) is an easy to use integrated penetration testing tool for finding vulnerabilities in web applications. download the latest version (i used 1.3.0) and install it on your system. after installing, launch the app and change the proxy port to 9000 (tools > options > local proxy). next, configure your browser to proxy requests through port 9000 and allow localhost requests to be proxied. i used firefox 4 (preferences > advanced > network > connection settings). when finished, your proxy settings should look like the following screenshot: another option (instead of removing localhost) is to add an entry to your hosts file with your production domain name. this is what i've done for this demo. 127.0.0.1 demo.raibledesigns.com i've also configured apache to proxy requests to jetty with the following mod_proxy settings in my httpd.conf: proxyrequests off proxypreservehost off proxypass / http://localhost:8080/ sslengine on sslproxyengine on sslcertificatefile "/etc/apache2/ssl.key/server.crt" sslcertificatekeyfile "/etc/apache2/ssl.key/server.key" proxypass / https://localhost:8443/ perform a scan now you need to give zap some data to work with. using firefox, i navigated to http://demo.raibledesigns.com and browsed around a bit, listing users, added a new one and deleted an existing one. after doing this, i noticed a number of flags in the zap ui under sites. i then right-clicked on each site (one for http and one for https) and selected attack > active scan site. you should be able to do this from the "active scan" tab at the bottom of zap, but there's a bug when the urls are the same . after doing this, i received a number of alerts, ranging from high (cross-site scripting) to low (password autocomplete). the screenshot below shows the various issues. now let's take a look at how to fix them. fix vulnerabilities one of the things not mentioned by the scan, but #1 in seven security (mis)configurations in java web.xml files , is custom error pages not configured. custom error pages are configured in this app, but error.jsp contains the following code: please check your log files for further information. stack traces can be really useful to an attacker, so it's important to start by removing the above code from src/main/webapp/error.jsp . the rest of the issues have to do with xss, autocomplete, and cookies. let's start with the easy ones. fixing autocomplete is easy enough; simply changed the html in login.jsp and userform.jsp to have autocomplete="off" as part of the tag. then modify web.xml so http-only and secure cookies are used. while you're at it, add session-timeout and tracking-mode as recommended by the aforementioned web.xml misconfigurations article. 15 true true cookie next, modify spring security's remember me configuration so it uses secure cookies. to do this, add use-secure-cookies="true" to the element in security.xml . unfortunately, spring security doesn't support httponly cookies , but will in a future release. the next issue to solve is disabling directory browsing. you can do this by copying jetty's webdefault.xml (from the org.eclipse.jetty:jetty-webapp jar) into src/test/resources and changing its "dirallowed" to false: default org.mortbay.jetty.servlet.defaultservlet acceptranges true dirallowed false you'll also need to modify the plugin's configuration to point to this file by adding it to the section in pom.xml. / src/test/resources/webdefault.xml of course, if you're running in production you'll want to configure this in your server's settings rather than in your pom.xml file. next, i set out to fix secure page browser cache issues . i had the following settings in my sitemesh decorator: however, according to zap, the first meta tag should have "no-cache" instead of "no-store", so i changed it to "no-cache". after making all these changes, i created a new zap session and ran an active scan on both sites again. below are the results: i believe the first issue (parameter tampering) is because i show the error page when a duplicate user exists. to fix this, i changed userformcontroller so it catches a userexistsexception and sends the user back to the form. try { usermanager.saveuser(user); } catch (userexistsexception uex) { result.adderror(new objecterror("user", uex.getmessage())); return "userform"; } however, this still doesn't seem to cause the alert to go away. this is likely because i'm not filtering/escaping html when it's first submitted. i believe the best solution for this would be to use something like owasp's esapi to filter parameter values. however, i was unable to find integration with spring mvc's data binding, so i decided not to try and fix this vulnerability. finally, i tried to disable jsessionid in urls using suggestions from stack overflow . the previous setting in web.xml (cookie) should do this, but it doesn't seem to work with jetty 8. the other issues (secure page browser cache, httponly cookies and secure cookies), i was unable to solve. the last two are issues caused by spring security as far as i can tell. summary in this article, i've shown you how to pentest a web application using firefox and owasp's zed attack proxy (zap). i found zap to be a nice tool for figuring out vulnerabilities, but it'd be nice if it had a "retest" feature to see if you fixed an issue for a particular url. it does have a "resend" feature, but running it didn't seem to clear alerts after i'd fixed them. the issues i wasn't able to solve seemed to be mostly related to frameworks (e.g. spring security and httponly cookies) or servers (jetty not using cookies for tracking). my suspicion is the jetty issues are because it doesn't support servlet 3 as well as it advertises. i believe this is fair; i am using a milestone release after all. i tried scanning http://demo.raibledesigns.com/ajax-login (which runs on tomcat 7 at contegix ) and confirmed that no jsessionid exists. hopefully this article has helped you understand how to figure out security vulnerabilities in your web applications. i believe zap will continue to get more popular as developers become aware of it. if you feel ambitious and want to try and solve all of the issues in my ajax login application, feel free to fork it on github . if you're interested in talking more about webapp security, please leave a comment, meet me at jazoon later this week or let's talk in july at über conf . from http://raibledesigns.com/rd/entry/java_web_application_security_part4
June 22, 2011
by Matt Raible
· 27,971 Views · 2 Likes
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Java EE6 Events, a lightweight alternative to JMS
A few weeks ago I attended a bejug meeting about Java EE 6, Building next generation enterprise applications. Having read much about it, I did not expect to see much shocking hidden features. But there was one part of the demo I really found impressive. Due to its loose coupling, Enterprise possibilities and simplicity. The feature I’m going to talk about today is the event mechanism that is in java EE 6. The general idea is to fire an event and let an eventlistener pick it up. I have created this example that is totally useless, but it simplicity helps me to focus on the important stuff. I’m going to fire a LogEvent from my backing action, that will log to the java.util.Logger. The first thing I need is to create a pojo that contains my log message and my LogLevel. public class LogMessage implements Serializable { private final String message; private final Level level; LogMessage(String message, Level level) { this.message = message; this.level = level; } public String getMessage() { return message; } public Level getLevel() { return level; } } easy peasy. Now that I have my data wrapper, I need something to fire the event and something to pick it up. The first thing I create is my method where I fire the event. Due to CDI I can inject an event. @Inject Event event; So we just need to fire it. event.fire(new LogMessage("Log it baby!", Level.INFO)); Now the event is fired, If no one is registerd to pick it up, it disappears into oblivion, thus we create a listener. The listeners needs a method that has one parameter, the generic type that is given to the previous event. LogMessage. public class LogListener { private static final Logger LOGGER = Logger.getAnonymousLogger(); public void process(@Observes LogMessage message){ LOGGER.log(message.getLevel(), message.getMessage()); } } The @Observes annotation listens to all events with a LogMessage. When the event is fired, this method will be triggered. This is a very nice way to create a loosely coupled application, you can separate heavy operations or encapsulate less essential operations in these event listeners. All of this all happens synchronously. When we want to replace the log statement with a slow database call to a logging table, we could make our operation heavier than it should be. What I’m looking for is to create an asynchronous call. As long as we support EJB, we can transform our Listener to an EJB by adding the @Stateless annotation on top of it. Now it’s a statless enterprise bean. This changes nothing to our sync/async problem, but EJB 3.1 support async operations. So if we also add the @Asynchronous annotation on top of it. It will asynchronously execute our logging statement. @Stateless @Asynchronous public class LogListener { private static final Logger LOGGER = Logger.getAnonymousLogger(); public void process(@Observes LogMessage message){ LOGGER.log(message.getLevel(), message.getMessage()); } } If we would want to combine the database logging and the console logging, we can just create multiple methods that listen to the same event. This is a great way to create a lightweight application with a very flexible components. The alternative solution to this problem is to use JMS, but you don’t want a heavyweight configuration for this kind of loosely coupling. Java EE has worked hard to get rid of the stigma of being heavyweight, I think they are getting there From http://styledideas.be/blog/2011/05/22/java-ee6-events-a-lightweight-alternative-to-jms/
June 22, 2011
by Jelle Victoor
· 20,945 Views · 2 Likes
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Developing Android Apps with NetBeans, Maven, and VirtualBox
I am an experienced Java developer who has used various IDEs and prefer NetBeans IDE over all others by a long shot. I am also very fond of Maven as the tool to simplify and automate nearly every aspect of the development of my Java project throughout its lifecycle. Recently, I started developing Android applications and naturally I looked for a Maven plugin that would manage my Android projects. Luckily I found the maven-android-plugin which worked like a charm and allowed me to use Maven for developing my Android projects. The Android Emulator from the Android SDK seemed unusably slow. Lucklily, I found a way to use an Android Virtual Machine for VirtualBox that worked nearly as fast as my native computer! This page documents my experiences. Tested Environment Dev machine: Ubuntu 11.04 Linux IDE: NetBeans VirtualBox: 4.0.8 r71778 Android SDK Revision 11, Add on XML Schema #1, Repository XML Schema #3 (from About in SDK and AVD Manager) Android Version: 2.2 Overview of Steps Download and install the Android SDK on your dev machine Attach an Android Device to dev machine Configure and load your device for development and other use Create an initial Android maven project Connect Android Device to Android SDK Debug Android app using NetBeans Graphical Debuger Download and Install Android SDK Download and install the Android SDK on your dev machine as described here. Make sure to set the following in dev machine ~/.bashrc file: export ANDROID_HOME=$HOME/android-sdk-linux_x86 #Change as needed export PATH="$ANDROID_HOME/tools:$ANDROID_HOME/platform-tools:$PATH" Attaching an Android Device to Dev Machine If you have an actual device that is usually always best. If not, you must use a virtual Android device which usually has various limitations (e.g. no GPS, Camera etc.). The Android SDK makes it easy to create a new Virtual Device but the resulting device is painfully slow in my experience and not usable. Do not bother with this. Instead, create a virtual Android device using VirtualBox as described in the following steps: Install virtual box and initial Android VM as described here: http://androidspin.com/2011/01/24/howto-install-android-x86-2-2-in-virtualbox/ http://geeknizer.com/how-to-run-google-android-in-virtualbox-vmware-on-netbooks/ Configure Android VM so it is connected bidirectionally with your dev machine over TCP as described here: http://stackoverflow.com/questions/61156/virtualbox-host-guest-network-setup I used the approach of configuring a HOST ONLY network adapater and a second NAT adapter on the Android VM within virtual box. Configuring your Android Device This section describes various things I did to setup a dev environment for my Android device: Root the device. I used Universal AndRoot Install ConnectBot so you have ssh and related network utilities Creating Initial Android Maven Application Create initial project using instructions here. I found it best to create stub project structure using the maven-archtype-plugin and the archtypes at https://github.com/akquinet/android-archetypes/wiki Connecting Android VM Device to Android SDK In order for your code to be deployed from NetBeans IDE to Android Device and in order for you to monitor your deployed app from the Dalvik Debug Monitor (ddms) you need to connect your android VM device to the android sdk over TCP as described in the following steps. On Android Device open the Terminal Emulator Type su to become root (your device must be rooted for this Type following commands in root shell: setprop service.adb.tcp.port 5555 stop adbd start adbd Type the following commands on dev machine shell. TODO: Note that IP address below is whatever is the ip address associated with the device (see ifconfig on linux for device vboxnet0) adb tcpip 5555 adb connect 192.168.0.101:5555 For details on above steps see: http://stackoverflow.com/questions/2604727/how-can-i-connect-to-android-with-adb-over-tcp Set up port forwarding as described here http://redkrieg.com/2010/10/11/adb-over-ssh-fun-with-port-forwards/ (this is where I am most fuzzy) Build your maven android project using Right-Click / Clean and Build Now for the acid test whether you can deploy your app to the device from NetBeans IDE! Right-click / Custom / Goal to show Run Maven dialog. Enter android:deploy in Goals field. Select Remember As button and enter android:deploy for its text field. If all is well, the app will deploy to the device and will show up in its "Applications" screen. Debugging Android App Using NetBeans Graphical Debugger Once you can build and deploy your app to the real or virtual Android device, here are the steps to debug the app using NetBeans debugger: On Device: Start the app (TODO: determine how to start app on device with JVM options so it can wait for debugger connection. This should be easy) On Dev Machine run Dalvik Debug Monitor (ddms) in background: $ANDROID_HOME/tools/ddms & Lookup your app in ddms and get its debug port. This is described here but does not address NetBeans specifically In NetBeans do: Debug / Attach Debugger and specify the port looked up in ddms in previous step. You may leave rest of the fields with defaults. Click OK
June 18, 2011
by Farrukh Najmi
· 173,671 Views
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